Gene : Sobic.006G269200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11772//PTHR11772:SF14 - ASPARAGINE SYNTHETASE // SUBFAMILY NOT NAMED Genomic Order:  2811
Name:  ? Sobic.006G269200 Secondary Identifier:  ? PAC:37948038
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G269200 0.5kb upstream 0.5kb upstream 2142 true Chr06: 60188765-60190906 Sorghum bicolor
Sobic.006G269200 0.5kb upstream 0.5kb upstream 500 false Chr06: 60190407-60190906 Sorghum bicolor
Sobic.006G269200 0.5kb downstream 0.5kb downstream 2142 true Chr06: 60188265-60190406 Sorghum bicolor
Sobic.006G269200 0.5kb downstream 0.5kb downstream 500 false Chr06: 60188265-60188764 Sorghum bicolor
Sobic.006G269200 1.0kb upstream 1.0kb upstream 2642 true Chr06: 60188765-60191406 Sorghum bicolor
Sobic.006G269200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 60190407-60191406 Sorghum bicolor
Sobic.006G269200 1.0kb downstream 1.0kb downstream 2642 true Chr06: 60187765-60190406 Sorghum bicolor
Sobic.006G269200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 60187765-60188764 Sorghum bicolor
Sobic.006G269200 2.0kb upstream 2.0kb upstream 3642 true Chr06: 60188765-60192406 Sorghum bicolor
Sobic.006G269200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 60190407-60192406 Sorghum bicolor
Sobic.006G269200 2.0kb downstream 2.0kb downstream 3642 true Chr06: 60186765-60190406 Sorghum bicolor
Sobic.006G269200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 60186765-60188764 Sorghum bicolor
Sobic.006G269200 5.0kb upstream 5.0kb upstream 6642 true Chr06: 60188765-60195406 Sorghum bicolor
Sobic.006G269200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 60190407-60195406 Sorghum bicolor
Sobic.006G269200 5.0kb downstream 5.0kb downstream 6642 true Chr06: 60183765-60190406 Sorghum bicolor
Sobic.006G269200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 60183765-60188764 Sorghum bicolor
Sobic.006G269200 10.0kb upstream 10.0kb upstream 11642 true Chr06: 60188765-60200406 Sorghum bicolor
Sobic.006G269200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 60190407-60200406 Sorghum bicolor
Sobic.006G269200 10.0kb downstream 10.0kb downstream 11642 true Chr06: 60178765-60190406 Sorghum bicolor
Sobic.006G269200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 60178765-60188764 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190615 5267 Panicoideae View MSA
124572860 5269 Grass View MSA
122046778 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 123.984     High High
cufflinks 4.332        
cufflinks 2.016       Low
cufflinks 10.993        
cufflinks 50.418     High  
cufflinks 3.436       Low
cufflinks 2.291       Low
cufflinks 31.73     High  
cufflinks 11.202        
cufflinks 17.312     High  
cufflinks 61.807     High High
cufflinks 6.717        
cufflinks 5.041        
cufflinks 53.559     High  
cufflinks 11.996     High  
cufflinks 26.727     High  
cufflinks 1.591       Low
cufflinks 1.241       Low
cufflinks 22.374     High  
cufflinks 1.584       Low
cufflinks 47.145     High  
cufflinks 82.944     High High
cufflinks 3.607       Low
cufflinks 3.48       Low
cufflinks 6.363        
cufflinks 9.777     High  
cufflinks 24.353     High  
cufflinks 675.202     High High
cufflinks 19.253     High  
cufflinks 11.249        

0 Strain