Gene : Sobic.006G269800 S. bicolor v3.1.1
Defline:  (1 of 1) K03144 - transcription initiation factor TFIIH subunit 4 (TFIIH4, GTF2H4, TFB2) Genomic Order:  2818
Name:  ? Sobic.006G269800 Secondary Identifier:  ? PAC:37945505
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G269800 0.5kb upstream 0.5kb upstream 8100 true Chr06: 60215797-60223896 Sorghum bicolor
Sobic.006G269800 0.5kb upstream 0.5kb upstream 500 false Chr06: 60215797-60216296 Sorghum bicolor
Sobic.006G269800 0.5kb downstream 0.5kb downstream 8100 true Chr06: 60216297-60224396 Sorghum bicolor
Sobic.006G269800 0.5kb downstream 0.5kb downstream 500 false Chr06: 60223897-60224396 Sorghum bicolor
Sobic.006G269800 1.0kb upstream 1.0kb upstream 8600 true Chr06: 60215297-60223896 Sorghum bicolor
Sobic.006G269800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 60215297-60216296 Sorghum bicolor
Sobic.006G269800 1.0kb downstream 1.0kb downstream 8600 true Chr06: 60216297-60224896 Sorghum bicolor
Sobic.006G269800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 60223897-60224896 Sorghum bicolor
Sobic.006G269800 2.0kb upstream 2.0kb upstream 9600 true Chr06: 60214297-60223896 Sorghum bicolor
Sobic.006G269800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 60214297-60216296 Sorghum bicolor
Sobic.006G269800 2.0kb downstream 2.0kb downstream 9600 true Chr06: 60216297-60225896 Sorghum bicolor
Sobic.006G269800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 60223897-60225896 Sorghum bicolor
Sobic.006G269800 5.0kb upstream 5.0kb upstream 12600 true Chr06: 60211297-60223896 Sorghum bicolor
Sobic.006G269800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 60211297-60216296 Sorghum bicolor
Sobic.006G269800 5.0kb downstream 5.0kb downstream 12600 true Chr06: 60216297-60228896 Sorghum bicolor
Sobic.006G269800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 60223897-60228896 Sorghum bicolor
Sobic.006G269800 10.0kb upstream 10.0kb upstream 17600 true Chr06: 60206297-60223896 Sorghum bicolor
Sobic.006G269800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 60206297-60216296 Sorghum bicolor
Sobic.006G269800 10.0kb downstream 10.0kb downstream 17600 true Chr06: 60216297-60233896 Sorghum bicolor
Sobic.006G269800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 60223897-60233896 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182623 5267 Panicoideae View MSA
124579755 5269 Grass View MSA
122042198 5273 Angiosperm View MSA
121346770 5274 Embryophyte View MSA
123427579 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.67        
cufflinks 0.605       Low
cufflinks 1.17       Low
cufflinks 1.949        
cufflinks 3.259       High
cufflinks 2.983        
cufflinks 1.496        
cufflinks 1.195       Low
cufflinks 3.555       High
cufflinks 3.481       High
cufflinks 1.827        
cufflinks 1.855        
cufflinks 2.188        
cufflinks 1.72        
cufflinks 2.482        
cufflinks 0.863       Low
cufflinks 1.677        
cufflinks 1.654        
cufflinks 0.946       Low
cufflinks 1.591        
cufflinks 4.648       High
cufflinks 2.438        
cufflinks 1.956        
cufflinks 2.074        
cufflinks 1.172       Low
cufflinks 0.584       Low
cufflinks 2.113        
cufflinks 6.741       High
cufflinks 1.755        
cufflinks 2.986        

0 Strain