Gene : Sobic.006G270400 S. bicolor v3.1.1
Defline:  (1 of 2) K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) Genomic Order:  2824
Name:  ? Sobic.006G270400 Secondary Identifier:  ? PAC:37949295
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G270400 0.5kb upstream 0.5kb upstream 6967 true Chr06: 60263437-60270403 Sorghum bicolor
Sobic.006G270400 0.5kb upstream 0.5kb upstream 500 false Chr06: 60269904-60270403 Sorghum bicolor
Sobic.006G270400 0.5kb downstream 0.5kb downstream 6967 true Chr06: 60262937-60269903 Sorghum bicolor
Sobic.006G270400 0.5kb downstream 0.5kb downstream 500 false Chr06: 60262937-60263436 Sorghum bicolor
Sobic.006G270400 1.0kb upstream 1.0kb upstream 7467 true Chr06: 60263437-60270903 Sorghum bicolor
Sobic.006G270400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 60269904-60270903 Sorghum bicolor
Sobic.006G270400 1.0kb downstream 1.0kb downstream 7467 true Chr06: 60262437-60269903 Sorghum bicolor
Sobic.006G270400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 60262437-60263436 Sorghum bicolor
Sobic.006G270400 2.0kb upstream 2.0kb upstream 8467 true Chr06: 60263437-60271903 Sorghum bicolor
Sobic.006G270400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 60269904-60271903 Sorghum bicolor
Sobic.006G270400 2.0kb downstream 2.0kb downstream 8467 true Chr06: 60261437-60269903 Sorghum bicolor
Sobic.006G270400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 60261437-60263436 Sorghum bicolor
Sobic.006G270400 5.0kb upstream 5.0kb upstream 11467 true Chr06: 60263437-60274903 Sorghum bicolor
Sobic.006G270400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 60269904-60274903 Sorghum bicolor
Sobic.006G270400 5.0kb downstream 5.0kb downstream 11467 true Chr06: 60258437-60269903 Sorghum bicolor
Sobic.006G270400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 60258437-60263436 Sorghum bicolor
Sobic.006G270400 10.0kb upstream 10.0kb upstream 16467 true Chr06: 60263437-60279903 Sorghum bicolor
Sobic.006G270400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 60269904-60279903 Sorghum bicolor
Sobic.006G270400 10.0kb downstream 10.0kb downstream 16467 true Chr06: 60253437-60269903 Sorghum bicolor
Sobic.006G270400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 60253437-60263436 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183497 5267 Panicoideae View MSA
124586558 5269 Grass View MSA
122045224 5273 Angiosperm View MSA
121347248 5274 Embryophyte View MSA
123428295 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.828     High  
cufflinks 0.15       Low
cufflinks 0.235       Low
cufflinks 0.368       Low
cufflinks 29.803     High High
cufflinks 1.504        
cufflinks 14.566     High  
cufflinks 1.228        
cufflinks 4.851        
cufflinks 8.165        
cufflinks 11.502        
cufflinks 11.499        
cufflinks 6.825        
cufflinks 10.508        
cufflinks 13.747     High  
cufflinks 0.183       Low
cufflinks 14.035     High  
cufflinks 14.238     High  
cufflinks 0.614       Low
cufflinks 13.903     High  
cufflinks 33.975     High High
cufflinks 11.73     High  
cufflinks 11.79     High  
cufflinks 12.914     High  
cufflinks 0.163       Low
cufflinks 0.141       Low
cufflinks 5.348        
cufflinks 2.784        
cufflinks 4.947        
cufflinks 20.292     High  

0 Strain