Gene : Sobic.006G277100 S. bicolor v3.1.1
Defline:  (1 of 60) PF00892 - EamA-like transporter family (EamA) Genomic Order:  2897
Name:  ? Sobic.006G277100 Secondary Identifier:  ? PAC:37946590
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G277100 0.5kb upstream 0.5kb upstream 3882 true Chr06: 60796871-60800752 Sorghum bicolor
Sobic.006G277100 0.5kb upstream 0.5kb upstream 500 false Chr06: 60796871-60797370 Sorghum bicolor
Sobic.006G277100 0.5kb downstream 0.5kb downstream 3882 true Chr06: 60797371-60801252 Sorghum bicolor
Sobic.006G277100 0.5kb downstream 0.5kb downstream 500 false Chr06: 60800753-60801252 Sorghum bicolor
Sobic.006G277100 1.0kb upstream 1.0kb upstream 4382 true Chr06: 60796371-60800752 Sorghum bicolor
Sobic.006G277100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 60796371-60797370 Sorghum bicolor
Sobic.006G277100 1.0kb downstream 1.0kb downstream 4382 true Chr06: 60797371-60801752 Sorghum bicolor
Sobic.006G277100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 60800753-60801752 Sorghum bicolor
Sobic.006G277100 2.0kb upstream 2.0kb upstream 5382 true Chr06: 60795371-60800752 Sorghum bicolor
Sobic.006G277100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 60795371-60797370 Sorghum bicolor
Sobic.006G277100 2.0kb downstream 2.0kb downstream 5382 true Chr06: 60797371-60802752 Sorghum bicolor
Sobic.006G277100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 60800753-60802752 Sorghum bicolor
Sobic.006G277100 5.0kb upstream 5.0kb upstream 8382 true Chr06: 60792371-60800752 Sorghum bicolor
Sobic.006G277100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 60792371-60797370 Sorghum bicolor
Sobic.006G277100 5.0kb downstream 5.0kb downstream 8382 true Chr06: 60797371-60805752 Sorghum bicolor
Sobic.006G277100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 60800753-60805752 Sorghum bicolor
Sobic.006G277100 10.0kb upstream 10.0kb upstream 13382 true Chr06: 60787371-60800752 Sorghum bicolor
Sobic.006G277100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 60787371-60797370 Sorghum bicolor
Sobic.006G277100 10.0kb downstream 10.0kb downstream 13382 true Chr06: 60797371-60810752 Sorghum bicolor
Sobic.006G277100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 60800753-60810752 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175371 5267 Panicoideae View MSA
124569329 5269 Grass View MSA
122050761 5273 Angiosperm View MSA
121312106 5274 Embryophyte View MSA
123349308 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.767        
cufflinks 0.039     Low Low
cufflinks 0.089        
cufflinks 0.06     Low Low
cufflinks 0.372        
cufflinks 0.226        
cufflinks 0.312        
cufflinks 0.016     Low Low
cufflinks 1.472       High
cufflinks 1.573       High
cufflinks 0.195        
cufflinks 0.321        
cufflinks 1.312       High
cufflinks 0.267        
cufflinks 0.638        
cufflinks 0.01     Low Low
cufflinks 0.154        
cufflinks 0.159        
cufflinks 0.021     Low Low
cufflinks 0.256        
cufflinks 0.031     Low Low
cufflinks 0.243        
cufflinks 0.297        
cufflinks 0.216        
cufflinks 0.165        
cufflinks 0.037     Low Low
cufflinks 0.225        
cufflinks 0.775        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.403        

0 Strain