Gene : Sobic.006G244900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12668//PTHR12668:SF5 - TRANSMEMBRANE PROTEIN 14, 15 // UPF0136 MEMBRANE PROTEIN YJR085C Genomic Order:  2557
Name:  ? Sobic.006G244900 Secondary Identifier:  ? PAC:37945385
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G244900 0.5kb upstream 0.5kb upstream 3687 true Chr06: 58469597-58473283 Sorghum bicolor
Sobic.006G244900 0.5kb upstream 0.5kb upstream 500 false Chr06: 58472784-58473283 Sorghum bicolor
Sobic.006G244900 0.5kb downstream 0.5kb downstream 3687 true Chr06: 58469097-58472783 Sorghum bicolor
Sobic.006G244900 0.5kb downstream 0.5kb downstream 500 false Chr06: 58469097-58469596 Sorghum bicolor
Sobic.006G244900 1.0kb upstream 1.0kb upstream 4187 true Chr06: 58469597-58473783 Sorghum bicolor
Sobic.006G244900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 58472784-58473783 Sorghum bicolor
Sobic.006G244900 1.0kb downstream 1.0kb downstream 4187 true Chr06: 58468597-58472783 Sorghum bicolor
Sobic.006G244900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 58468597-58469596 Sorghum bicolor
Sobic.006G244900 2.0kb upstream 2.0kb upstream 5187 true Chr06: 58469597-58474783 Sorghum bicolor
Sobic.006G244900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 58472784-58474783 Sorghum bicolor
Sobic.006G244900 2.0kb downstream 2.0kb downstream 5187 true Chr06: 58467597-58472783 Sorghum bicolor
Sobic.006G244900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 58467597-58469596 Sorghum bicolor
Sobic.006G244900 5.0kb upstream 5.0kb upstream 8187 true Chr06: 58469597-58477783 Sorghum bicolor
Sobic.006G244900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 58472784-58477783 Sorghum bicolor
Sobic.006G244900 5.0kb downstream 5.0kb downstream 8187 true Chr06: 58464597-58472783 Sorghum bicolor
Sobic.006G244900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 58464597-58469596 Sorghum bicolor
Sobic.006G244900 10.0kb upstream 10.0kb upstream 13187 true Chr06: 58469597-58482783 Sorghum bicolor
Sobic.006G244900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 58472784-58482783 Sorghum bicolor
Sobic.006G244900 10.0kb downstream 10.0kb downstream 13187 true Chr06: 58459597-58472783 Sorghum bicolor
Sobic.006G244900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 58459597-58469596 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180053 5267 Panicoideae View MSA
124570225 5269 Grass View MSA
122047216 5273 Angiosperm View MSA
121351322 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.883     High High
cufflinks 3.719       Low
cufflinks 10.196     High  
cufflinks 17.802     High  
cufflinks 10.505        
cufflinks 13.69     High  
cufflinks 12.526     High  
cufflinks 8.906     High  
cufflinks 16.311     High  
cufflinks 14.533     High  
cufflinks 19.336     High  
cufflinks 14.491     High  
cufflinks 15.633     High  
cufflinks 19.415     High  
cufflinks 11.649        
cufflinks 7.45       Low
cufflinks 11.717     High  
cufflinks 12.458     High  
cufflinks 6.8       Low
cufflinks 13.801     High  
cufflinks 9.013        
cufflinks 21.414     High High
cufflinks 19.274     High  
cufflinks 21.32     High High
cufflinks 7.284       Low
cufflinks 3.897       Low
cufflinks 10.515        
cufflinks 20.865     High High
cufflinks 15.063     High  
cufflinks 14.684     High  

0 Strain