Gene : Sobic.006G250100 S. bicolor v3.1.1
Defline:  (1 of 1) 3.5.4.34 - tRNA(Ala)(adenine(37)) deaminase Genomic Order:  2613
Name:  ? Sobic.006G250100 Secondary Identifier:  ? PAC:37945977
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G250100 0.5kb upstream 0.5kb upstream 3670 true Chr06: 58902857-58906526 Sorghum bicolor
Sobic.006G250100 0.5kb upstream 0.5kb upstream 500 false Chr06: 58902857-58903356 Sorghum bicolor
Sobic.006G250100 0.5kb downstream 0.5kb downstream 3670 true Chr06: 58903357-58907026 Sorghum bicolor
Sobic.006G250100 0.5kb downstream 0.5kb downstream 500 false Chr06: 58906527-58907026 Sorghum bicolor
Sobic.006G250100 1.0kb upstream 1.0kb upstream 4170 true Chr06: 58902357-58906526 Sorghum bicolor
Sobic.006G250100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 58902357-58903356 Sorghum bicolor
Sobic.006G250100 1.0kb downstream 1.0kb downstream 4170 true Chr06: 58903357-58907526 Sorghum bicolor
Sobic.006G250100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 58906527-58907526 Sorghum bicolor
Sobic.006G250100 2.0kb upstream 2.0kb upstream 5170 true Chr06: 58901357-58906526 Sorghum bicolor
Sobic.006G250100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 58901357-58903356 Sorghum bicolor
Sobic.006G250100 2.0kb downstream 2.0kb downstream 5170 true Chr06: 58903357-58908526 Sorghum bicolor
Sobic.006G250100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 58906527-58908526 Sorghum bicolor
Sobic.006G250100 5.0kb upstream 5.0kb upstream 8170 true Chr06: 58898357-58906526 Sorghum bicolor
Sobic.006G250100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 58898357-58903356 Sorghum bicolor
Sobic.006G250100 5.0kb downstream 5.0kb downstream 8170 true Chr06: 58903357-58911526 Sorghum bicolor
Sobic.006G250100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 58906527-58911526 Sorghum bicolor
Sobic.006G250100 10.0kb upstream 10.0kb upstream 13170 true Chr06: 58893357-58906526 Sorghum bicolor
Sobic.006G250100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 58893357-58903356 Sorghum bicolor
Sobic.006G250100 10.0kb downstream 10.0kb downstream 13170 true Chr06: 58903357-58916526 Sorghum bicolor
Sobic.006G250100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 58906527-58916526 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188439 5267 Panicoideae View MSA
124575419 5269 Grass View MSA
122043164 5273 Angiosperm View MSA
121346845 5274 Embryophyte View MSA
123424595 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.165       High
cufflinks 0.234       Low
cufflinks 0.421       Low
cufflinks 0.691        
cufflinks 1.865        
cufflinks 2.271       High
cufflinks 0.937        
cufflinks 0.238       Low
cufflinks 2.087        
cufflinks 1.878        
cufflinks 1.035        
cufflinks 1.321        
cufflinks 1.42        
cufflinks 1.25        
cufflinks 1.398        
cufflinks 0.229       Low
cufflinks 0.848        
cufflinks 0.874        
cufflinks 0.603        
cufflinks 1.062        
cufflinks 3.905       High
cufflinks 1.289        
cufflinks 1.054        
cufflinks 1.218        
cufflinks 0.329       Low
cufflinks 0.221       Low
cufflinks 1.063        
cufflinks 3.704       High
cufflinks 1.006        
cufflinks 2.989       High

0 Strain