Gene : Sobic.006G249500 S. bicolor v3.1.1
Defline:  (1 of 1) K16914 - bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 [EC:1.14.11.- 1.14.11.27] (NO66) Genomic Order:  2607
Name:  ? Sobic.006G249500 Secondary Identifier:  ? PAC:37945753
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G249500 0.5kb upstream 0.5kb upstream 3925 true Chr06: 58878079-58882003 Sorghum bicolor
Sobic.006G249500 0.5kb upstream 0.5kb upstream 500 false Chr06: 58881504-58882003 Sorghum bicolor
Sobic.006G249500 0.5kb downstream 0.5kb downstream 3925 true Chr06: 58877579-58881503 Sorghum bicolor
Sobic.006G249500 0.5kb downstream 0.5kb downstream 500 false Chr06: 58877579-58878078 Sorghum bicolor
Sobic.006G249500 1.0kb upstream 1.0kb upstream 4425 true Chr06: 58878079-58882503 Sorghum bicolor
Sobic.006G249500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 58881504-58882503 Sorghum bicolor
Sobic.006G249500 1.0kb downstream 1.0kb downstream 4425 true Chr06: 58877079-58881503 Sorghum bicolor
Sobic.006G249500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 58877079-58878078 Sorghum bicolor
Sobic.006G249500 2.0kb upstream 2.0kb upstream 5425 true Chr06: 58878079-58883503 Sorghum bicolor
Sobic.006G249500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 58881504-58883503 Sorghum bicolor
Sobic.006G249500 2.0kb downstream 2.0kb downstream 5425 true Chr06: 58876079-58881503 Sorghum bicolor
Sobic.006G249500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 58876079-58878078 Sorghum bicolor
Sobic.006G249500 5.0kb upstream 5.0kb upstream 8425 true Chr06: 58878079-58886503 Sorghum bicolor
Sobic.006G249500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 58881504-58886503 Sorghum bicolor
Sobic.006G249500 5.0kb downstream 5.0kb downstream 8425 true Chr06: 58873079-58881503 Sorghum bicolor
Sobic.006G249500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 58873079-58878078 Sorghum bicolor
Sobic.006G249500 10.0kb upstream 10.0kb upstream 13425 true Chr06: 58878079-58891503 Sorghum bicolor
Sobic.006G249500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 58881504-58891503 Sorghum bicolor
Sobic.006G249500 10.0kb downstream 10.0kb downstream 13425 true Chr06: 58868079-58881503 Sorghum bicolor
Sobic.006G249500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 58868079-58878078 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180220 5267 Panicoideae View MSA
124588284 5269 Grass View MSA
122049109 5273 Angiosperm View MSA
121348798 5274 Embryophyte View MSA
123428618 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.868       High
cufflinks 0.286       Low
cufflinks 0.328       Low
cufflinks 0.66        
cufflinks 2.572       High
cufflinks 1.332        
cufflinks 1.115        
cufflinks 0.646        
cufflinks 1.628        
cufflinks 1.741        
cufflinks 1.036        
cufflinks 1.181        
cufflinks 1.09        
cufflinks 1.593        
cufflinks 0.912        
cufflinks 0.512       Low
cufflinks 1.361        
cufflinks 1.199        
cufflinks 0.44       Low
cufflinks 1.404        
cufflinks 4.052       High
cufflinks 0.727        
cufflinks 1.335        
cufflinks 1.279        
cufflinks 0.324       Low
cufflinks 0.332       Low
cufflinks 0.86        
cufflinks 2.653       High
cufflinks 1.084        
cufflinks 1.128        

0 Strain