Gene : 29908.t000129 R. communis v0.1
Defline:  (1 of 3) PTHR11778//PTHR11778:SF0 - SERYL-TRNA SYNTHETASE // SERINE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  226
Name:  ? 29908.t000129 Secondary Identifier:  ? PAC:16812899
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis TRNA-CHARGING-PWY Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29908.t000129 0.5kb upstream 0.5kb upstream 3594 true 29908: 1493126-1496719 Ricinus communis
29908.t000129 0.5kb upstream 0.5kb upstream 500 false 29908: 1493126-1493625 Ricinus communis
29908.t000129 0.5kb downstream 0.5kb downstream 3594 true 29908: 1493626-1497219 Ricinus communis
29908.t000129 0.5kb downstream 0.5kb downstream 500 false 29908: 1496720-1497219 Ricinus communis
29908.t000129 1.0kb upstream 1.0kb upstream 4094 true 29908: 1492626-1496719 Ricinus communis
29908.t000129 1.0kb upstream 1.0kb upstream 1000 false 29908: 1492626-1493625 Ricinus communis
29908.t000129 1.0kb downstream 1.0kb downstream 4094 true 29908: 1493626-1497719 Ricinus communis
29908.t000129 1.0kb downstream 1.0kb downstream 1000 false 29908: 1496720-1497719 Ricinus communis
29908.t000129 2.0kb upstream 2.0kb upstream 5094 true 29908: 1491626-1496719 Ricinus communis
29908.t000129 2.0kb upstream 2.0kb upstream 2000 false 29908: 1491626-1493625 Ricinus communis
29908.t000129 2.0kb downstream 2.0kb downstream 5094 true 29908: 1493626-1498719 Ricinus communis
29908.t000129 2.0kb downstream 2.0kb downstream 2000 false 29908: 1496720-1498719 Ricinus communis
29908.t000129 5.0kb upstream 5.0kb upstream 8094 true 29908: 1488626-1496719 Ricinus communis
29908.t000129 5.0kb upstream 5.0kb upstream 5000 false 29908: 1488626-1493625 Ricinus communis
29908.t000129 5.0kb downstream 5.0kb downstream 8094 true 29908: 1493626-1501719 Ricinus communis
29908.t000129 5.0kb downstream 5.0kb downstream 5000 false 29908: 1496720-1501719 Ricinus communis
29908.t000129 10.0kb upstream 10.0kb upstream 13094 true 29908: 1483626-1496719 Ricinus communis
29908.t000129 10.0kb upstream 10.0kb upstream 10000 false 29908: 1483626-1493625 Ricinus communis
29908.t000129 10.0kb downstream 10.0kb downstream 13094 true 29908: 1493626-1506719 Ricinus communis
29908.t000129 10.0kb downstream 10.0kb downstream 10000 false 29908: 1496720-1506719 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122447876 5262 Malpighiales View MSA
124235714 5268 Malvidae View MSA
124074907 5270 Rosid View MSA
123738384 5271 Pentapetalae View MSA
122793450 5272 Eudicot View MSA
122045874 5273 Angiosperm View MSA
121344249 5274 Embryophyte View MSA
123424928 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain