Gene : Sobic.004G004300 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR13402//PTHR13402:SF12 - RGPR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  40
Name:  ? Sobic.004G004300 Secondary Identifier:  ? PAC:37929241
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G004300 0.5kb upstream 0.5kb upstream 14306 true Chr04: 372502-386807 Sorghum bicolor
Sobic.004G004300 0.5kb upstream 0.5kb upstream 500 false Chr04: 372502-373001 Sorghum bicolor
Sobic.004G004300 0.5kb downstream 0.5kb downstream 14306 true Chr04: 373002-387307 Sorghum bicolor
Sobic.004G004300 0.5kb downstream 0.5kb downstream 500 false Chr04: 386808-387307 Sorghum bicolor
Sobic.004G004300 1.0kb upstream 1.0kb upstream 14806 true Chr04: 372002-386807 Sorghum bicolor
Sobic.004G004300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 372002-373001 Sorghum bicolor
Sobic.004G004300 1.0kb downstream 1.0kb downstream 14806 true Chr04: 373002-387807 Sorghum bicolor
Sobic.004G004300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 386808-387807 Sorghum bicolor
Sobic.004G004300 2.0kb upstream 2.0kb upstream 15806 true Chr04: 371002-386807 Sorghum bicolor
Sobic.004G004300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 371002-373001 Sorghum bicolor
Sobic.004G004300 2.0kb downstream 2.0kb downstream 15806 true Chr04: 373002-388807 Sorghum bicolor
Sobic.004G004300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 386808-388807 Sorghum bicolor
Sobic.004G004300 5.0kb upstream 5.0kb upstream 18806 true Chr04: 368002-386807 Sorghum bicolor
Sobic.004G004300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 368002-373001 Sorghum bicolor
Sobic.004G004300 5.0kb downstream 5.0kb downstream 18806 true Chr04: 373002-391807 Sorghum bicolor
Sobic.004G004300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 386808-391807 Sorghum bicolor
Sobic.004G004300 10.0kb upstream 10.0kb upstream 23806 true Chr04: 363002-386807 Sorghum bicolor
Sobic.004G004300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 363002-373001 Sorghum bicolor
Sobic.004G004300 10.0kb downstream 10.0kb downstream 23806 true Chr04: 373002-396807 Sorghum bicolor
Sobic.004G004300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 386808-396807 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184261 5267 Panicoideae View MSA
124577352 5269 Grass View MSA
122051498 5273 Angiosperm View MSA
121349781 5274 Embryophyte View MSA
123425826 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.238       Low
cufflinks 4.519       Low
cufflinks 4.471       Low
cufflinks 3.81       Low
cufflinks 14.793     High High
cufflinks 6.876        
cufflinks 9.601        
cufflinks 6.794        
cufflinks 12.978     High  
cufflinks 11.748        
cufflinks 11.417        
cufflinks 13.971     High  
cufflinks 12.857     High  
cufflinks 12.878     High  
cufflinks 9.616        
cufflinks 3.851       Low
cufflinks 8.718        
cufflinks 8.467        
cufflinks 8.826        
cufflinks 8.999        
cufflinks 11.612        
cufflinks 13.612     High  
cufflinks 13.676     High  
cufflinks 14.706     High High
cufflinks 7.544        
cufflinks 5.599       Low
cufflinks 10.079        
cufflinks 4.297       Low
cufflinks 9.761        
cufflinks 10.972        

0 Strain