Gene : Sobic.004G004200 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR13402//PTHR13402:SF12 - RGPR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  39
Name:  ? Sobic.004G004200 Secondary Identifier:  ? PAC:37929847
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G004200 0.5kb upstream 0.5kb upstream 7219 true Chr04: 360455-367673 Sorghum bicolor
Sobic.004G004200 0.5kb upstream 0.5kb upstream 500 false Chr04: 360455-360954 Sorghum bicolor
Sobic.004G004200 0.5kb downstream 0.5kb downstream 7219 true Chr04: 360955-368173 Sorghum bicolor
Sobic.004G004200 0.5kb downstream 0.5kb downstream 500 false Chr04: 367674-368173 Sorghum bicolor
Sobic.004G004200 1.0kb upstream 1.0kb upstream 7719 true Chr04: 359955-367673 Sorghum bicolor
Sobic.004G004200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 359955-360954 Sorghum bicolor
Sobic.004G004200 1.0kb downstream 1.0kb downstream 7719 true Chr04: 360955-368673 Sorghum bicolor
Sobic.004G004200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 367674-368673 Sorghum bicolor
Sobic.004G004200 2.0kb upstream 2.0kb upstream 8719 true Chr04: 358955-367673 Sorghum bicolor
Sobic.004G004200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 358955-360954 Sorghum bicolor
Sobic.004G004200 2.0kb downstream 2.0kb downstream 8719 true Chr04: 360955-369673 Sorghum bicolor
Sobic.004G004200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 367674-369673 Sorghum bicolor
Sobic.004G004200 5.0kb upstream 5.0kb upstream 11719 true Chr04: 355955-367673 Sorghum bicolor
Sobic.004G004200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 355955-360954 Sorghum bicolor
Sobic.004G004200 5.0kb downstream 5.0kb downstream 11719 true Chr04: 360955-372673 Sorghum bicolor
Sobic.004G004200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 367674-372673 Sorghum bicolor
Sobic.004G004200 10.0kb upstream 10.0kb upstream 16719 true Chr04: 350955-367673 Sorghum bicolor
Sobic.004G004200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 350955-360954 Sorghum bicolor
Sobic.004G004200 10.0kb downstream 10.0kb downstream 16719 true Chr04: 360955-377673 Sorghum bicolor
Sobic.004G004200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 367674-377673 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184261 5267 Panicoideae View MSA
124577352 5269 Grass View MSA
122051498 5273 Angiosperm View MSA
121349781 5274 Embryophyte View MSA
123425826 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.307        
cufflinks 4.146       Low
cufflinks 6.046       Low
cufflinks 5.651       Low
cufflinks 14.776     High  
cufflinks 7.766        
cufflinks 11.548     High  
cufflinks 8.925     High  
cufflinks 15.218     High  
cufflinks 13.517     High  
cufflinks 15.674     High  
cufflinks 19.37     High High
cufflinks 14.623     High  
cufflinks 20.093     High High
cufflinks 14.208     High  
cufflinks 5.596       Low
cufflinks 10.548        
cufflinks 9.767        
cufflinks 10.648        
cufflinks 10.025        
cufflinks 9.507        
cufflinks 15.624     High  
cufflinks 19.871     High High
cufflinks 19.587     High High
cufflinks 8.011        
cufflinks 5.299       Low
cufflinks 16.142     High  
cufflinks 3.825       Low
cufflinks 13.439     High  
cufflinks 16.423     High  

0 Strain