Gene : Sobic.004G003900 S. bicolor v3.1.1
Defline:  (1 of 1) K13427 - nitric-oxide synthase, plant (NOA1) Genomic Order:  37
Name:  ? Sobic.004G003900 Secondary Identifier:  ? PAC:37931926
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6845 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G003900 0.5kb upstream 0.5kb upstream 6359 true Chr04: 346284-352642 Sorghum bicolor
Sobic.004G003900 0.5kb upstream 0.5kb upstream 500 false Chr04: 346284-346783 Sorghum bicolor
Sobic.004G003900 0.5kb downstream 0.5kb downstream 6359 true Chr04: 346784-353142 Sorghum bicolor
Sobic.004G003900 0.5kb downstream 0.5kb downstream 500 false Chr04: 352643-353142 Sorghum bicolor
Sobic.004G003900 1.0kb upstream 1.0kb upstream 6859 true Chr04: 345784-352642 Sorghum bicolor
Sobic.004G003900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 345784-346783 Sorghum bicolor
Sobic.004G003900 1.0kb downstream 1.0kb downstream 6859 true Chr04: 346784-353642 Sorghum bicolor
Sobic.004G003900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 352643-353642 Sorghum bicolor
Sobic.004G003900 2.0kb upstream 2.0kb upstream 7859 true Chr04: 344784-352642 Sorghum bicolor
Sobic.004G003900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 344784-346783 Sorghum bicolor
Sobic.004G003900 2.0kb downstream 2.0kb downstream 7859 true Chr04: 346784-354642 Sorghum bicolor
Sobic.004G003900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 352643-354642 Sorghum bicolor
Sobic.004G003900 5.0kb upstream 5.0kb upstream 10859 true Chr04: 341784-352642 Sorghum bicolor
Sobic.004G003900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 341784-346783 Sorghum bicolor
Sobic.004G003900 5.0kb downstream 5.0kb downstream 10859 true Chr04: 346784-357642 Sorghum bicolor
Sobic.004G003900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 352643-357642 Sorghum bicolor
Sobic.004G003900 10.0kb upstream 10.0kb upstream 15859 true Chr04: 336784-352642 Sorghum bicolor
Sobic.004G003900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 336784-346783 Sorghum bicolor
Sobic.004G003900 10.0kb downstream 10.0kb downstream 15859 true Chr04: 346784-362642 Sorghum bicolor
Sobic.004G003900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 352643-362642 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187050 5267 Panicoideae View MSA
124578495 5269 Grass View MSA
122045244 5273 Angiosperm View MSA
121346425 5274 Embryophyte View MSA
123426230 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.03       Low
cufflinks 0.633       Low
cufflinks 2.016        
cufflinks 1.969        
cufflinks 2.604        
cufflinks 2.958       High
cufflinks 2.839       High
cufflinks 2.455        
cufflinks 2.497        
cufflinks 2.151        
cufflinks 0.987       Low
cufflinks 1.2        
cufflinks 1.487        
cufflinks 1.201        
cufflinks 1.723        
cufflinks 1.357        
cufflinks 2.625        
cufflinks 3.162       High
cufflinks 1.93        
cufflinks 1.893        
cufflinks 3.099       High
cufflinks 1.5        
cufflinks 1.113        
cufflinks 1.072        
cufflinks 1.009       Low
cufflinks 0.52       Low
cufflinks 1.301        
cufflinks 1.488        
cufflinks 6.358       High
cufflinks 2.352        

0 Strain