Gene : Sobic.004G036700 S. bicolor v3.1.1
Defline:  (1 of 1) K02516 - protein arginine N-methyltransferase 5 (PRMT5, HSL7) Genomic Order:  386
Name:  ? Sobic.004G036700 Secondary Identifier:  ? PAC:37929348
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G036700 0.5kb upstream 0.5kb upstream 6897 true Chr04: 2938970-2945866 Sorghum bicolor
Sobic.004G036700 0.5kb upstream 0.5kb upstream 500 false Chr04: 2945367-2945866 Sorghum bicolor
Sobic.004G036700 0.5kb downstream 0.5kb downstream 6897 true Chr04: 2938470-2945366 Sorghum bicolor
Sobic.004G036700 0.5kb downstream 0.5kb downstream 500 false Chr04: 2938470-2938969 Sorghum bicolor
Sobic.004G036700 1.0kb upstream 1.0kb upstream 7397 true Chr04: 2938970-2946366 Sorghum bicolor
Sobic.004G036700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2945367-2946366 Sorghum bicolor
Sobic.004G036700 1.0kb downstream 1.0kb downstream 7397 true Chr04: 2937970-2945366 Sorghum bicolor
Sobic.004G036700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2937970-2938969 Sorghum bicolor
Sobic.004G036700 2.0kb upstream 2.0kb upstream 8397 true Chr04: 2938970-2947366 Sorghum bicolor
Sobic.004G036700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2945367-2947366 Sorghum bicolor
Sobic.004G036700 2.0kb downstream 2.0kb downstream 8397 true Chr04: 2936970-2945366 Sorghum bicolor
Sobic.004G036700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2936970-2938969 Sorghum bicolor
Sobic.004G036700 5.0kb upstream 5.0kb upstream 11397 true Chr04: 2938970-2950366 Sorghum bicolor
Sobic.004G036700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2945367-2950366 Sorghum bicolor
Sobic.004G036700 5.0kb downstream 5.0kb downstream 11397 true Chr04: 2933970-2945366 Sorghum bicolor
Sobic.004G036700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2933970-2938969 Sorghum bicolor
Sobic.004G036700 10.0kb upstream 10.0kb upstream 16397 true Chr04: 2938970-2955366 Sorghum bicolor
Sobic.004G036700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2945367-2955366 Sorghum bicolor
Sobic.004G036700 10.0kb downstream 10.0kb downstream 16397 true Chr04: 2928970-2945366 Sorghum bicolor
Sobic.004G036700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2928970-2938969 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040970 5273 Angiosperm View MSA
122175621 5267 Panicoideae View MSA
124574144 5269 Grass View MSA
121345711 5274 Embryophyte View MSA
123425938 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.242        
cufflinks 0.203       Low
cufflinks 1.095       Low
cufflinks 3.725        
cufflinks 8.396        
cufflinks 2.855        
cufflinks 3.569        
cufflinks 0.332       Low
cufflinks 8.139        
cufflinks 9.855        
cufflinks 9.792        
cufflinks 7.381        
cufflinks 3.7        
cufflinks 8.632        
cufflinks 3.383        
cufflinks 0.491       Low
cufflinks 3.956        
cufflinks 4.165        
cufflinks 0.665       Low
cufflinks 3.274        
cufflinks 12.251        
cufflinks 12.994     High  
cufflinks 10.559        
cufflinks 11.085     High  
cufflinks 0.469       Low
cufflinks 0.139       Low
cufflinks 6.846        
cufflinks 4.01        
cufflinks 2.29        
cufflinks 7.175        

0 Strain