Gene : Sobic.004G036600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13009//PTHR13009:SF5 - HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 // SUBFAMILY NOT NAMED Genomic Order:  385
Name:  ? Sobic.004G036600 Secondary Identifier:  ? PAC:37933585
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G036600 0.5kb upstream 0.5kb upstream 3577 true Chr04: 2935128-2938704 Sorghum bicolor
Sobic.004G036600 0.5kb upstream 0.5kb upstream 500 false Chr04: 2938205-2938704 Sorghum bicolor
Sobic.004G036600 0.5kb downstream 0.5kb downstream 3577 true Chr04: 2934628-2938204 Sorghum bicolor
Sobic.004G036600 0.5kb downstream 0.5kb downstream 500 false Chr04: 2934628-2935127 Sorghum bicolor
Sobic.004G036600 1.0kb upstream 1.0kb upstream 4077 true Chr04: 2935128-2939204 Sorghum bicolor
Sobic.004G036600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2938205-2939204 Sorghum bicolor
Sobic.004G036600 1.0kb downstream 1.0kb downstream 4077 true Chr04: 2934128-2938204 Sorghum bicolor
Sobic.004G036600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2934128-2935127 Sorghum bicolor
Sobic.004G036600 2.0kb upstream 2.0kb upstream 5077 true Chr04: 2935128-2940204 Sorghum bicolor
Sobic.004G036600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2938205-2940204 Sorghum bicolor
Sobic.004G036600 2.0kb downstream 2.0kb downstream 5077 true Chr04: 2933128-2938204 Sorghum bicolor
Sobic.004G036600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2933128-2935127 Sorghum bicolor
Sobic.004G036600 5.0kb upstream 5.0kb upstream 8077 true Chr04: 2935128-2943204 Sorghum bicolor
Sobic.004G036600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2938205-2943204 Sorghum bicolor
Sobic.004G036600 5.0kb downstream 5.0kb downstream 8077 true Chr04: 2930128-2938204 Sorghum bicolor
Sobic.004G036600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2930128-2935127 Sorghum bicolor
Sobic.004G036600 10.0kb upstream 10.0kb upstream 13077 true Chr04: 2935128-2948204 Sorghum bicolor
Sobic.004G036600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2938205-2948204 Sorghum bicolor
Sobic.004G036600 10.0kb downstream 10.0kb downstream 13077 true Chr04: 2925128-2938204 Sorghum bicolor
Sobic.004G036600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2925128-2935127 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186268 5267 Panicoideae View MSA
124571777 5269 Grass View MSA
122042378 5273 Angiosperm View MSA
121347282 5274 Embryophyte View MSA
123426157 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.965        
cufflinks 1.073       Low
cufflinks 24.563     High  
cufflinks 21.481     High  
cufflinks 53.095     High High
cufflinks 6.371        
cufflinks 4.837        
cufflinks 5.163        
cufflinks 8.973        
cufflinks 10.128        
cufflinks 17.179     High  
cufflinks 5.51        
cufflinks 14.583     High  
cufflinks 7.441        
cufflinks 10.95        
cufflinks 3.068       Low
cufflinks 9.302        
cufflinks 5.783        
cufflinks 3.88       Low
cufflinks 16.191     High  
cufflinks 6.925        
cufflinks 8.457        
cufflinks 8.445        
cufflinks 6.042        
cufflinks 2.157       Low
cufflinks 2.637       Low
cufflinks 22.018     High  
cufflinks 86.389     High High
cufflinks 5.727        
cufflinks 12.071     High  

0 Strain