Gene : Sobic.004G033100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR15217//PTHR15217:SF0 - WILMS' TUMOR 1-ASSOCIATING PROTEIN // PRE-MRNA-SPLICING REGULATOR WTAP Genomic Order:  349
Name:  ? Sobic.004G033100 Secondary Identifier:  ? PAC:37932003
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G033100 0.5kb upstream 0.5kb upstream 8423 true Chr04: 2661838-2670260 Sorghum bicolor
Sobic.004G033100 0.5kb upstream 0.5kb upstream 500 false Chr04: 2661838-2662337 Sorghum bicolor
Sobic.004G033100 0.5kb downstream 0.5kb downstream 8423 true Chr04: 2662338-2670760 Sorghum bicolor
Sobic.004G033100 0.5kb downstream 0.5kb downstream 500 false Chr04: 2670261-2670760 Sorghum bicolor
Sobic.004G033100 1.0kb upstream 1.0kb upstream 8923 true Chr04: 2661338-2670260 Sorghum bicolor
Sobic.004G033100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2661338-2662337 Sorghum bicolor
Sobic.004G033100 1.0kb downstream 1.0kb downstream 8923 true Chr04: 2662338-2671260 Sorghum bicolor
Sobic.004G033100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2670261-2671260 Sorghum bicolor
Sobic.004G033100 2.0kb upstream 2.0kb upstream 9923 true Chr04: 2660338-2670260 Sorghum bicolor
Sobic.004G033100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2660338-2662337 Sorghum bicolor
Sobic.004G033100 2.0kb downstream 2.0kb downstream 9923 true Chr04: 2662338-2672260 Sorghum bicolor
Sobic.004G033100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2670261-2672260 Sorghum bicolor
Sobic.004G033100 5.0kb upstream 5.0kb upstream 12923 true Chr04: 2657338-2670260 Sorghum bicolor
Sobic.004G033100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2657338-2662337 Sorghum bicolor
Sobic.004G033100 5.0kb downstream 5.0kb downstream 12923 true Chr04: 2662338-2675260 Sorghum bicolor
Sobic.004G033100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2670261-2675260 Sorghum bicolor
Sobic.004G033100 10.0kb upstream 10.0kb upstream 17923 true Chr04: 2652338-2670260 Sorghum bicolor
Sobic.004G033100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2652338-2662337 Sorghum bicolor
Sobic.004G033100 10.0kb downstream 10.0kb downstream 17923 true Chr04: 2662338-2680260 Sorghum bicolor
Sobic.004G033100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2670261-2680260 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199048 5267 Panicoideae View MSA
124569086 5269 Grass View MSA
122047600 5273 Angiosperm View MSA
123429059 5275 Viridiplantae View MSA
121346918 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.716        
cufflinks 0.708       Low
cufflinks 1.822        
cufflinks 2.519        
cufflinks 3.1        
cufflinks 4.863       High
cufflinks 1.972        
cufflinks 1.248       Low
cufflinks 5.573       High
cufflinks 4.223        
cufflinks 2.232        
cufflinks 2.639        
cufflinks 3.822        
cufflinks 2.612        
cufflinks 2.658        
cufflinks 1.1       Low
cufflinks 2.258        
cufflinks 2.436        
cufflinks 3.028        
cufflinks 2.826        
cufflinks 3.993        
cufflinks 3.465        
cufflinks 3.165        
cufflinks 2.778        
cufflinks 1.304       Low
cufflinks 0.77       Low
cufflinks 3.081        
cufflinks 15.479     High High
cufflinks 2.255        
cufflinks 3.485        

0 Strain