Gene : Sobic.004G031700 S. bicolor v3.1.1
Defline:  (1 of 1) KOG1493//KOG4172 - Anaphase-promoting complex (APC), subunit 11 // Predicted E3 ubiquitin ligase Genomic Order:  336
Name:  ? Sobic.004G031700 Secondary Identifier:  ? PAC:37933486
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G031700 0.5kb upstream 0.5kb upstream 9046 true Chr04: 2553615-2562660 Sorghum bicolor
Sobic.004G031700 0.5kb upstream 0.5kb upstream 500 false Chr04: 2553615-2554114 Sorghum bicolor
Sobic.004G031700 0.5kb downstream 0.5kb downstream 9046 true Chr04: 2554115-2563160 Sorghum bicolor
Sobic.004G031700 0.5kb downstream 0.5kb downstream 500 false Chr04: 2562661-2563160 Sorghum bicolor
Sobic.004G031700 1.0kb upstream 1.0kb upstream 9546 true Chr04: 2553115-2562660 Sorghum bicolor
Sobic.004G031700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2553115-2554114 Sorghum bicolor
Sobic.004G031700 1.0kb downstream 1.0kb downstream 9546 true Chr04: 2554115-2563660 Sorghum bicolor
Sobic.004G031700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2562661-2563660 Sorghum bicolor
Sobic.004G031700 2.0kb upstream 2.0kb upstream 10546 true Chr04: 2552115-2562660 Sorghum bicolor
Sobic.004G031700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2552115-2554114 Sorghum bicolor
Sobic.004G031700 2.0kb downstream 2.0kb downstream 10546 true Chr04: 2554115-2564660 Sorghum bicolor
Sobic.004G031700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2562661-2564660 Sorghum bicolor
Sobic.004G031700 5.0kb upstream 5.0kb upstream 13546 true Chr04: 2549115-2562660 Sorghum bicolor
Sobic.004G031700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2549115-2554114 Sorghum bicolor
Sobic.004G031700 5.0kb downstream 5.0kb downstream 13546 true Chr04: 2554115-2567660 Sorghum bicolor
Sobic.004G031700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2562661-2567660 Sorghum bicolor
Sobic.004G031700 10.0kb upstream 10.0kb upstream 18546 true Chr04: 2544115-2562660 Sorghum bicolor
Sobic.004G031700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2544115-2554114 Sorghum bicolor
Sobic.004G031700 10.0kb downstream 10.0kb downstream 18546 true Chr04: 2554115-2572660 Sorghum bicolor
Sobic.004G031700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2562661-2572660 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184489 5267 Panicoideae View MSA
124569011 5269 Grass View MSA
122043530 5273 Angiosperm View MSA
121343947 5274 Embryophyte View MSA
123379945 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.938       Low
cufflinks 0.871       Low
cufflinks 1.543        
cufflinks 1.386       Low
cufflinks 3.456       High
cufflinks 2.286        
cufflinks 2.171        
cufflinks 1.543        
cufflinks 3.734       High
cufflinks 2.376        
cufflinks 2.409        
cufflinks 3.148        
cufflinks 2.418        
cufflinks 2.835        
cufflinks 2.713        
cufflinks 1.985        
cufflinks 2.057        
cufflinks 2.199        
cufflinks 3.048        
cufflinks 2.092        
cufflinks 4.793       High
cufflinks 2.19        
cufflinks 2.712        
cufflinks 2.477        
cufflinks 1.827        
cufflinks 1.164       Low
cufflinks 2.854        
cufflinks 4.211       High
cufflinks 1.599        
cufflinks 3.167        

0 Strain