Gene : Sobic.004G016300 S. bicolor v3.1.1
Defline:  (1 of 437) PF13041 - PPR repeat family (PPR_2) Genomic Order:  167
Name:  ? Sobic.004G016300 Secondary Identifier:  ? PAC:37932279
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G016300 0.5kb upstream 0.5kb upstream 1879 true Chr04: 1301294-1303172 Sorghum bicolor
Sobic.004G016300 0.5kb upstream 0.5kb upstream 500 false Chr04: 1302673-1303172 Sorghum bicolor
Sobic.004G016300 0.5kb downstream 0.5kb downstream 1879 true Chr04: 1300794-1302672 Sorghum bicolor
Sobic.004G016300 0.5kb downstream 0.5kb downstream 500 false Chr04: 1300794-1301293 Sorghum bicolor
Sobic.004G016300 1.0kb upstream 1.0kb upstream 2379 true Chr04: 1301294-1303672 Sorghum bicolor
Sobic.004G016300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1302673-1303672 Sorghum bicolor
Sobic.004G016300 1.0kb downstream 1.0kb downstream 2379 true Chr04: 1300294-1302672 Sorghum bicolor
Sobic.004G016300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1300294-1301293 Sorghum bicolor
Sobic.004G016300 2.0kb upstream 2.0kb upstream 3379 true Chr04: 1301294-1304672 Sorghum bicolor
Sobic.004G016300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1302673-1304672 Sorghum bicolor
Sobic.004G016300 2.0kb downstream 2.0kb downstream 3379 true Chr04: 1299294-1302672 Sorghum bicolor
Sobic.004G016300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1299294-1301293 Sorghum bicolor
Sobic.004G016300 5.0kb upstream 5.0kb upstream 6379 true Chr04: 1301294-1307672 Sorghum bicolor
Sobic.004G016300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1302673-1307672 Sorghum bicolor
Sobic.004G016300 5.0kb downstream 5.0kb downstream 6379 true Chr04: 1296294-1302672 Sorghum bicolor
Sobic.004G016300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1296294-1301293 Sorghum bicolor
Sobic.004G016300 10.0kb upstream 10.0kb upstream 11379 true Chr04: 1301294-1312672 Sorghum bicolor
Sobic.004G016300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1302673-1312672 Sorghum bicolor
Sobic.004G016300 10.0kb downstream 10.0kb downstream 11379 true Chr04: 1291294-1302672 Sorghum bicolor
Sobic.004G016300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1291294-1301293 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189217 5267 Panicoideae View MSA
124574674 5269 Grass View MSA
122046913 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.851       High
cufflinks 0.402       Low
cufflinks 0.589       Low
cufflinks 1.001        
cufflinks 2.522        
cufflinks 3.21        
cufflinks 2.491        
cufflinks 0.736       Low
cufflinks 2.045        
cufflinks 1.643        
cufflinks 1.065        
cufflinks 1.906        
cufflinks 1.476        
cufflinks 1.981        
cufflinks 1.324        
cufflinks 1.161        
cufflinks 2.068        
cufflinks 2.38        
cufflinks 1.107        
cufflinks 2.506        
cufflinks 6.707       High
cufflinks 2.318        
cufflinks 1.347        
cufflinks 2.156        
cufflinks 0.794       Low
cufflinks 0.573       Low
cufflinks 1.036        
cufflinks 7.056       High
cufflinks 2.282        
cufflinks 2.061        

0 Strain