Gene : Sobic.004G013400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10516:SF319 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP18, CHLOROPLASTIC Genomic Order:  134
Name:  ? Sobic.004G013400 Secondary Identifier:  ? PAC:37930467
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G013400 0.5kb upstream 0.5kb upstream 2890 true Chr04: 1103956-1106845 Sorghum bicolor
Sobic.004G013400 0.5kb upstream 0.5kb upstream 500 false Chr04: 1103956-1104455 Sorghum bicolor
Sobic.004G013400 0.5kb downstream 0.5kb downstream 2890 true Chr04: 1104456-1107345 Sorghum bicolor
Sobic.004G013400 0.5kb downstream 0.5kb downstream 500 false Chr04: 1106846-1107345 Sorghum bicolor
Sobic.004G013400 1.0kb upstream 1.0kb upstream 3390 true Chr04: 1103456-1106845 Sorghum bicolor
Sobic.004G013400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1103456-1104455 Sorghum bicolor
Sobic.004G013400 1.0kb downstream 1.0kb downstream 3390 true Chr04: 1104456-1107845 Sorghum bicolor
Sobic.004G013400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1106846-1107845 Sorghum bicolor
Sobic.004G013400 2.0kb upstream 2.0kb upstream 4390 true Chr04: 1102456-1106845 Sorghum bicolor
Sobic.004G013400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1102456-1104455 Sorghum bicolor
Sobic.004G013400 2.0kb downstream 2.0kb downstream 4390 true Chr04: 1104456-1108845 Sorghum bicolor
Sobic.004G013400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1106846-1108845 Sorghum bicolor
Sobic.004G013400 5.0kb upstream 5.0kb upstream 7390 true Chr04: 1099456-1106845 Sorghum bicolor
Sobic.004G013400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1099456-1104455 Sorghum bicolor
Sobic.004G013400 5.0kb downstream 5.0kb downstream 7390 true Chr04: 1104456-1111845 Sorghum bicolor
Sobic.004G013400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1106846-1111845 Sorghum bicolor
Sobic.004G013400 10.0kb upstream 10.0kb upstream 12390 true Chr04: 1094456-1106845 Sorghum bicolor
Sobic.004G013400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1094456-1104455 Sorghum bicolor
Sobic.004G013400 10.0kb downstream 10.0kb downstream 12390 true Chr04: 1104456-1116845 Sorghum bicolor
Sobic.004G013400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1106846-1116845 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176814 5267 Panicoideae View MSA
124573789 5269 Grass View MSA
122046491 5273 Angiosperm View MSA
121345976 5274 Embryophyte View MSA
123426566 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.032     Low Low
cufflinks 2.624       High
cufflinks 1.289        
cufflinks 0.289        
cufflinks 0.772        
cufflinks 0.995        
cufflinks 4.129       High
cufflinks 10.519     High High
cufflinks 0.3        
cufflinks 0.22        
cufflinks 0.078     Low Low
cufflinks 0.079     Low Low
cufflinks 0.339        
cufflinks 0.058     Low Low
cufflinks 0.918        
cufflinks 1.083        
cufflinks 3.12       High
cufflinks 5.582       High
cufflinks 1.719        
cufflinks 1.12        
cufflinks 1.017        
cufflinks 0.058     Low Low
cufflinks 0.055     Low Low
cufflinks 0.051     Low Low
cufflinks 0.204        
cufflinks 2.653       High
cufflinks 0.219        
cufflinks 0.038     Low Low
cufflinks 13.834     High High
cufflinks 0.579        

0 Strain