Gene : Sobic.004G012400 S. bicolor v3.1.1
Defline:  (1 of 1) 2.7.1.36 - Mevalonate kinase Genomic Order:  124
Name:  ? Sobic.004G012400 Secondary Identifier:  ? PAC:37933358
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-5910 Sorghum bicolor pathologic  
Sbicolor PWY-922 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G012400 0.5kb upstream 0.5kb upstream 3912 true Chr04: 1029919-1033830 Sorghum bicolor
Sobic.004G012400 0.5kb upstream 0.5kb upstream 500 false Chr04: 1033331-1033830 Sorghum bicolor
Sobic.004G012400 0.5kb downstream 0.5kb downstream 3912 true Chr04: 1029419-1033330 Sorghum bicolor
Sobic.004G012400 0.5kb downstream 0.5kb downstream 500 false Chr04: 1029419-1029918 Sorghum bicolor
Sobic.004G012400 1.0kb upstream 1.0kb upstream 4412 true Chr04: 1029919-1034330 Sorghum bicolor
Sobic.004G012400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1033331-1034330 Sorghum bicolor
Sobic.004G012400 1.0kb downstream 1.0kb downstream 4412 true Chr04: 1028919-1033330 Sorghum bicolor
Sobic.004G012400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1028919-1029918 Sorghum bicolor
Sobic.004G012400 2.0kb upstream 2.0kb upstream 5412 true Chr04: 1029919-1035330 Sorghum bicolor
Sobic.004G012400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1033331-1035330 Sorghum bicolor
Sobic.004G012400 2.0kb downstream 2.0kb downstream 5412 true Chr04: 1027919-1033330 Sorghum bicolor
Sobic.004G012400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1027919-1029918 Sorghum bicolor
Sobic.004G012400 5.0kb upstream 5.0kb upstream 8412 true Chr04: 1029919-1038330 Sorghum bicolor
Sobic.004G012400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1033331-1038330 Sorghum bicolor
Sobic.004G012400 5.0kb downstream 5.0kb downstream 8412 true Chr04: 1024919-1033330 Sorghum bicolor
Sobic.004G012400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1024919-1029918 Sorghum bicolor
Sobic.004G012400 10.0kb upstream 10.0kb upstream 13412 true Chr04: 1029919-1043330 Sorghum bicolor
Sobic.004G012400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1033331-1043330 Sorghum bicolor
Sobic.004G012400 10.0kb downstream 10.0kb downstream 13412 true Chr04: 1019919-1033330 Sorghum bicolor
Sobic.004G012400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1019919-1029918 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041242 5273 Angiosperm View MSA
122179800 5267 Panicoideae View MSA
124569052 5269 Grass View MSA
121345229 5274 Embryophyte View MSA
123380177 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.402        
cufflinks 0.983       Low
cufflinks 3.751        
cufflinks 7.249        
cufflinks 11.987        
cufflinks 12.364        
cufflinks 7.347        
cufflinks 1.824       Low
cufflinks 12.491     High  
cufflinks 12.352     High  
cufflinks 10.719        
cufflinks 13.173     High  
cufflinks 8.412        
cufflinks 10.05        
cufflinks 8.008        
cufflinks 3.232       Low
cufflinks 8.387        
cufflinks 8.15        
cufflinks 3.257       Low
cufflinks 10.346        
cufflinks 15.269     High  
cufflinks 12.724     High  
cufflinks 12.257     High  
cufflinks 11.513     High  
cufflinks 1.616       Low
cufflinks 0.694       Low
cufflinks 13.719     High  
cufflinks 10.488     High  
cufflinks 4.541        
cufflinks 9.219        

0 Strain