Gene : Sobic.004G062100 S. bicolor v3.1.1
Defline:  (1 of 19) PF03110 - SBP domain (SBP) Genomic Order:  641
Name:  ? Sobic.004G062100 Secondary Identifier:  ? PAC:37932100
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G062100 0.5kb upstream 0.5kb upstream 4233 true Chr04: 5015089-5019321 Sorghum bicolor
Sobic.004G062100 0.5kb upstream 0.5kb upstream 500 false Chr04: 5015089-5015588 Sorghum bicolor
Sobic.004G062100 0.5kb downstream 0.5kb downstream 4233 true Chr04: 5015589-5019821 Sorghum bicolor
Sobic.004G062100 0.5kb downstream 0.5kb downstream 500 false Chr04: 5019322-5019821 Sorghum bicolor
Sobic.004G062100 1.0kb upstream 1.0kb upstream 4733 true Chr04: 5014589-5019321 Sorghum bicolor
Sobic.004G062100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5014589-5015588 Sorghum bicolor
Sobic.004G062100 1.0kb downstream 1.0kb downstream 4733 true Chr04: 5015589-5020321 Sorghum bicolor
Sobic.004G062100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5019322-5020321 Sorghum bicolor
Sobic.004G062100 2.0kb upstream 2.0kb upstream 5733 true Chr04: 5013589-5019321 Sorghum bicolor
Sobic.004G062100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5013589-5015588 Sorghum bicolor
Sobic.004G062100 2.0kb downstream 2.0kb downstream 5733 true Chr04: 5015589-5021321 Sorghum bicolor
Sobic.004G062100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5019322-5021321 Sorghum bicolor
Sobic.004G062100 5.0kb upstream 5.0kb upstream 8733 true Chr04: 5010589-5019321 Sorghum bicolor
Sobic.004G062100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5010589-5015588 Sorghum bicolor
Sobic.004G062100 5.0kb downstream 5.0kb downstream 8733 true Chr04: 5015589-5024321 Sorghum bicolor
Sobic.004G062100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5019322-5024321 Sorghum bicolor
Sobic.004G062100 10.0kb upstream 10.0kb upstream 13733 true Chr04: 5005589-5019321 Sorghum bicolor
Sobic.004G062100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5005589-5015588 Sorghum bicolor
Sobic.004G062100 10.0kb downstream 10.0kb downstream 13733 true Chr04: 5015589-5029321 Sorghum bicolor
Sobic.004G062100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5019322-5029321 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187743 5267 Panicoideae View MSA
124580549 5269 Grass View MSA
122042410 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121309962 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.152        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.77       High
cufflinks 0.027     Low  
cufflinks 0.004     Low Low
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.546       High
cufflinks 0.734       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.467       High
cufflinks 0.836       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.077     Low  

0 Strain