Gene : Sobic.004G056300 S. bicolor v3.1.1
Defline:  (1 of 1) PF01464 - Transglycosylase SLT domain (SLT) Genomic Order:  584
Name:  ? Sobic.004G056300 Secondary Identifier:  ? PAC:37931558
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G056300 0.5kb upstream 0.5kb upstream 11855 true Chr04: 4523583-4535437 Sorghum bicolor
Sobic.004G056300 0.5kb upstream 0.5kb upstream 500 false Chr04: 4534938-4535437 Sorghum bicolor
Sobic.004G056300 0.5kb downstream 0.5kb downstream 11855 true Chr04: 4523083-4534937 Sorghum bicolor
Sobic.004G056300 0.5kb downstream 0.5kb downstream 500 false Chr04: 4523083-4523582 Sorghum bicolor
Sobic.004G056300 1.0kb upstream 1.0kb upstream 12355 true Chr04: 4523583-4535937 Sorghum bicolor
Sobic.004G056300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4534938-4535937 Sorghum bicolor
Sobic.004G056300 1.0kb downstream 1.0kb downstream 12355 true Chr04: 4522583-4534937 Sorghum bicolor
Sobic.004G056300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4522583-4523582 Sorghum bicolor
Sobic.004G056300 2.0kb upstream 2.0kb upstream 13355 true Chr04: 4523583-4536937 Sorghum bicolor
Sobic.004G056300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4534938-4536937 Sorghum bicolor
Sobic.004G056300 2.0kb downstream 2.0kb downstream 13355 true Chr04: 4521583-4534937 Sorghum bicolor
Sobic.004G056300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4521583-4523582 Sorghum bicolor
Sobic.004G056300 5.0kb upstream 5.0kb upstream 16355 true Chr04: 4523583-4539937 Sorghum bicolor
Sobic.004G056300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4534938-4539937 Sorghum bicolor
Sobic.004G056300 5.0kb downstream 5.0kb downstream 16355 true Chr04: 4518583-4534937 Sorghum bicolor
Sobic.004G056300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4518583-4523582 Sorghum bicolor
Sobic.004G056300 10.0kb upstream 10.0kb upstream 21355 true Chr04: 4523583-4544937 Sorghum bicolor
Sobic.004G056300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4534938-4544937 Sorghum bicolor
Sobic.004G056300 10.0kb downstream 10.0kb downstream 21355 true Chr04: 4513583-4534937 Sorghum bicolor
Sobic.004G056300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4513583-4523582 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026274 5273 Angiosperm View MSA
122181470 5267 Panicoideae View MSA
124578354 5269 Grass View MSA
121350872 5274 Embryophyte View MSA
123381917 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.057     Low Low
cufflinks 0.376        
cufflinks 0.61        
cufflinks 0.439        
cufflinks 0.237        
cufflinks 1.712       High
cufflinks 0.747        
cufflinks 0.652        
cufflinks 1.746       High
cufflinks 0.87        
cufflinks 0.08     Low Low
cufflinks 0.247        
cufflinks 4.146       High
cufflinks 0.161       Low
cufflinks 1.192       High
cufflinks 0.375        
cufflinks 0.852        
cufflinks 0.744        
cufflinks 0.584        
cufflinks 1.154       High
cufflinks 0.16       Low
cufflinks 0.208        
cufflinks 0.152       Low
cufflinks 0.142       Low
cufflinks 0.324        
cufflinks 0.429        
cufflinks 0.19        
cufflinks 0.083       Low
cufflinks 0.681        
cufflinks 0.539        

0 Strain