Gene : Sobic.004G057400 S. bicolor v3.1.1
Defline:  (1 of 5) K17686 - Cu+-exporting ATPase (copA, ATP7) Genomic Order:  597
Name:  ? Sobic.004G057400 Secondary Identifier:  ? PAC:37932155
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G057400 0.5kb upstream 0.5kb upstream 5437 true Chr04: 4590758-4596194 Sorghum bicolor
Sobic.004G057400 0.5kb upstream 0.5kb upstream 500 false Chr04: 4595695-4596194 Sorghum bicolor
Sobic.004G057400 0.5kb downstream 0.5kb downstream 5437 true Chr04: 4590258-4595694 Sorghum bicolor
Sobic.004G057400 0.5kb downstream 0.5kb downstream 500 false Chr04: 4590258-4590757 Sorghum bicolor
Sobic.004G057400 1.0kb upstream 1.0kb upstream 5937 true Chr04: 4590758-4596694 Sorghum bicolor
Sobic.004G057400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4595695-4596694 Sorghum bicolor
Sobic.004G057400 1.0kb downstream 1.0kb downstream 5937 true Chr04: 4589758-4595694 Sorghum bicolor
Sobic.004G057400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4589758-4590757 Sorghum bicolor
Sobic.004G057400 2.0kb upstream 2.0kb upstream 6937 true Chr04: 4590758-4597694 Sorghum bicolor
Sobic.004G057400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4595695-4597694 Sorghum bicolor
Sobic.004G057400 2.0kb downstream 2.0kb downstream 6937 true Chr04: 4588758-4595694 Sorghum bicolor
Sobic.004G057400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4588758-4590757 Sorghum bicolor
Sobic.004G057400 5.0kb upstream 5.0kb upstream 9937 true Chr04: 4590758-4600694 Sorghum bicolor
Sobic.004G057400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4595695-4600694 Sorghum bicolor
Sobic.004G057400 5.0kb downstream 5.0kb downstream 9937 true Chr04: 4585758-4595694 Sorghum bicolor
Sobic.004G057400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4585758-4590757 Sorghum bicolor
Sobic.004G057400 10.0kb upstream 10.0kb upstream 14937 true Chr04: 4590758-4605694 Sorghum bicolor
Sobic.004G057400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4595695-4605694 Sorghum bicolor
Sobic.004G057400 10.0kb downstream 10.0kb downstream 14937 true Chr04: 4580758-4595694 Sorghum bicolor
Sobic.004G057400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4580758-4590757 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177707 5267 Panicoideae View MSA
124578380 5269 Grass View MSA
122045942 5273 Angiosperm View MSA
121346195 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.679       Low
cufflinks 6.01       Low
cufflinks 15.76     High  
cufflinks 15.482     High  
cufflinks 10.287        
cufflinks 13.75     High  
cufflinks 8.883        
cufflinks 9.448     High  
cufflinks 19.487     High High
cufflinks 16.342     High  
cufflinks 19.964     High High
cufflinks 24.038     High High
cufflinks 14.844     High  
cufflinks 17.703     High High
cufflinks 16.969     High  
cufflinks 11.351     High  
cufflinks 8.719        
cufflinks 8.991        
cufflinks 12.319     High  
cufflinks 11.716        
cufflinks 13.51        
cufflinks 13.05     High  
cufflinks 17.826     High High
cufflinks 16.392     High  
cufflinks 12.534     High  
cufflinks 6.28     High Low
cufflinks 21.158     High High
cufflinks 9.876     High  
cufflinks 7.436       Low
cufflinks 16.003     High  

0 Strain