Gene : Sobic.004G054300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12419//PTHR12419:SF17 - OTU DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  566
Name:  ? Sobic.004G054300 Secondary Identifier:  ? PAC:37933809
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G054300 0.5kb upstream 0.5kb upstream 4437 true Chr04: 4410651-4415087 Sorghum bicolor
Sobic.004G054300 0.5kb upstream 0.5kb upstream 500 false Chr04: 4414588-4415087 Sorghum bicolor
Sobic.004G054300 0.5kb downstream 0.5kb downstream 4437 true Chr04: 4410151-4414587 Sorghum bicolor
Sobic.004G054300 0.5kb downstream 0.5kb downstream 500 false Chr04: 4410151-4410650 Sorghum bicolor
Sobic.004G054300 1.0kb upstream 1.0kb upstream 4937 true Chr04: 4410651-4415587 Sorghum bicolor
Sobic.004G054300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4414588-4415587 Sorghum bicolor
Sobic.004G054300 1.0kb downstream 1.0kb downstream 4937 true Chr04: 4409651-4414587 Sorghum bicolor
Sobic.004G054300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4409651-4410650 Sorghum bicolor
Sobic.004G054300 2.0kb upstream 2.0kb upstream 5937 true Chr04: 4410651-4416587 Sorghum bicolor
Sobic.004G054300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4414588-4416587 Sorghum bicolor
Sobic.004G054300 2.0kb downstream 2.0kb downstream 5937 true Chr04: 4408651-4414587 Sorghum bicolor
Sobic.004G054300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4408651-4410650 Sorghum bicolor
Sobic.004G054300 5.0kb upstream 5.0kb upstream 8937 true Chr04: 4410651-4419587 Sorghum bicolor
Sobic.004G054300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4414588-4419587 Sorghum bicolor
Sobic.004G054300 5.0kb downstream 5.0kb downstream 8937 true Chr04: 4405651-4414587 Sorghum bicolor
Sobic.004G054300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4405651-4410650 Sorghum bicolor
Sobic.004G054300 10.0kb upstream 10.0kb upstream 13937 true Chr04: 4410651-4424587 Sorghum bicolor
Sobic.004G054300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4414588-4424587 Sorghum bicolor
Sobic.004G054300 10.0kb downstream 10.0kb downstream 13937 true Chr04: 4400651-4414587 Sorghum bicolor
Sobic.004G054300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4400651-4410650 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194869 5267 Panicoideae View MSA
124586821 5269 Grass View MSA
122048999 5273 Angiosperm View MSA
121348332 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.779     High  
cufflinks 1.927       Low
cufflinks 9.008        
cufflinks 14.5     High  
cufflinks 12.923     High  
cufflinks 10.35        
cufflinks 7.485        
cufflinks 3.355       Low
cufflinks 13.134     High  
cufflinks 16.136     High High
cufflinks 9.06        
cufflinks 10.542        
cufflinks 14.028     High  
cufflinks 10.829        
cufflinks 11.133        
cufflinks 5.856        
cufflinks 8.657        
cufflinks 8.497        
cufflinks 4.631       Low
cufflinks 12.038     High  
cufflinks 13.717        
cufflinks 12.472     High  
cufflinks 11.735     High  
cufflinks 9.99        
cufflinks 4.369       Low
cufflinks 1.945       Low
cufflinks 10.566        
cufflinks 13.65     High  
cufflinks 7.868        
cufflinks 10.676        

0 Strain