Gene : Sobic.004G055800 S. bicolor v3.1.1
Defline:  similar to Putative uncharacterized protein Genomic Order:  580
Name:  ? Sobic.004G055800 Secondary Identifier:  ? PAC:37931000
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G055800 0.5kb upstream 0.5kb upstream 2564 true Chr04: 4498675-4501238 Sorghum bicolor
Sobic.004G055800 0.5kb upstream 0.5kb upstream 500 false Chr04: 4500739-4501238 Sorghum bicolor
Sobic.004G055800 0.5kb downstream 0.5kb downstream 2564 true Chr04: 4498175-4500738 Sorghum bicolor
Sobic.004G055800 0.5kb downstream 0.5kb downstream 500 false Chr04: 4498175-4498674 Sorghum bicolor
Sobic.004G055800 1.0kb upstream 1.0kb upstream 3064 true Chr04: 4498675-4501738 Sorghum bicolor
Sobic.004G055800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4500739-4501738 Sorghum bicolor
Sobic.004G055800 1.0kb downstream 1.0kb downstream 3064 true Chr04: 4497675-4500738 Sorghum bicolor
Sobic.004G055800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4497675-4498674 Sorghum bicolor
Sobic.004G055800 2.0kb upstream 2.0kb upstream 4064 true Chr04: 4498675-4502738 Sorghum bicolor
Sobic.004G055800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4500739-4502738 Sorghum bicolor
Sobic.004G055800 2.0kb downstream 2.0kb downstream 4064 true Chr04: 4496675-4500738 Sorghum bicolor
Sobic.004G055800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4496675-4498674 Sorghum bicolor
Sobic.004G055800 5.0kb upstream 5.0kb upstream 7064 true Chr04: 4498675-4505738 Sorghum bicolor
Sobic.004G055800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4500739-4505738 Sorghum bicolor
Sobic.004G055800 5.0kb downstream 5.0kb downstream 7064 true Chr04: 4493675-4500738 Sorghum bicolor
Sobic.004G055800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4493675-4498674 Sorghum bicolor
Sobic.004G055800 10.0kb upstream 10.0kb upstream 12064 true Chr04: 4498675-4510738 Sorghum bicolor
Sobic.004G055800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4500739-4510738 Sorghum bicolor
Sobic.004G055800 10.0kb downstream 10.0kb downstream 12064 true Chr04: 4488675-4500738 Sorghum bicolor
Sobic.004G055800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4488675-4498674 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026396 5273 Angiosperm View MSA
122189999 5267 Panicoideae View MSA
124571732 5269 Grass View MSA
121296309 5274 Embryophyte View MSA
123334495 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.749       High
cufflinks 0.582       Low
cufflinks 2.099        
cufflinks 3.269        
cufflinks 2.954        
cufflinks 2.893        
cufflinks 2.503        
cufflinks 1.131       Low
cufflinks 2.412        
cufflinks 2.286        
cufflinks 2.589        
cufflinks 2.062        
cufflinks 1.57        
cufflinks 2.367        
cufflinks 2.541        
cufflinks 1.422       Low
cufflinks 2.861        
cufflinks 2.66        
cufflinks 1.151       Low
cufflinks 3.339        
cufflinks 4.862       High
cufflinks 2.748        
cufflinks 2.68        
cufflinks 2.739        
cufflinks 1.226       Low
cufflinks 0.785       Low
cufflinks 1.531        
cufflinks 3.613       High
cufflinks 1.829        
cufflinks 3.067        

0 Strain