Gene : Sobic.004G053500 S. bicolor v3.1.1
Defline:  (1 of 1) K17263 - cullin-associated NEDD8-dissociated protein 1 (CAND1) Genomic Order:  558
Name:  ? Sobic.004G053500 Secondary Identifier:  ? PAC:37930626
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G053500 0.5kb upstream 0.5kb upstream 10739 true Chr04: 4351658-4362396 Sorghum bicolor
Sobic.004G053500 0.5kb upstream 0.5kb upstream 500 false Chr04: 4361897-4362396 Sorghum bicolor
Sobic.004G053500 0.5kb downstream 0.5kb downstream 10739 true Chr04: 4351158-4361896 Sorghum bicolor
Sobic.004G053500 0.5kb downstream 0.5kb downstream 500 false Chr04: 4351158-4351657 Sorghum bicolor
Sobic.004G053500 1.0kb upstream 1.0kb upstream 11239 true Chr04: 4351658-4362896 Sorghum bicolor
Sobic.004G053500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4361897-4362896 Sorghum bicolor
Sobic.004G053500 1.0kb downstream 1.0kb downstream 11239 true Chr04: 4350658-4361896 Sorghum bicolor
Sobic.004G053500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4350658-4351657 Sorghum bicolor
Sobic.004G053500 2.0kb upstream 2.0kb upstream 12239 true Chr04: 4351658-4363896 Sorghum bicolor
Sobic.004G053500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4361897-4363896 Sorghum bicolor
Sobic.004G053500 2.0kb downstream 2.0kb downstream 12239 true Chr04: 4349658-4361896 Sorghum bicolor
Sobic.004G053500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4349658-4351657 Sorghum bicolor
Sobic.004G053500 5.0kb upstream 5.0kb upstream 15239 true Chr04: 4351658-4366896 Sorghum bicolor
Sobic.004G053500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4361897-4366896 Sorghum bicolor
Sobic.004G053500 5.0kb downstream 5.0kb downstream 15239 true Chr04: 4346658-4361896 Sorghum bicolor
Sobic.004G053500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4346658-4351657 Sorghum bicolor
Sobic.004G053500 10.0kb upstream 10.0kb upstream 20239 true Chr04: 4351658-4371896 Sorghum bicolor
Sobic.004G053500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4361897-4371896 Sorghum bicolor
Sobic.004G053500 10.0kb downstream 10.0kb downstream 20239 true Chr04: 4341658-4361896 Sorghum bicolor
Sobic.004G053500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4341658-4351657 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181866 5267 Panicoideae View MSA
124570091 5269 Grass View MSA
122049783 5273 Angiosperm View MSA
121344585 5274 Embryophyte View MSA
123423876 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.807     High  
cufflinks 6.084       Low
cufflinks 13.415     High  
cufflinks 13.574     High  
cufflinks 29.193     High  
cufflinks 9.255       Low
cufflinks 20.714     High  
cufflinks 9.858     High Low
cufflinks 28.5     High  
cufflinks 27.185     High  
cufflinks 27.942     High  
cufflinks 30.612     High  
cufflinks 19.627     High  
cufflinks 26.709     High  
cufflinks 20.961     High  
cufflinks 9.972     High Low
cufflinks 19.853     High  
cufflinks 21.834     High  
cufflinks 9.698       Low
cufflinks 22.523     High  
cufflinks 44.557     High High
cufflinks 31.233     High  
cufflinks 32.106     High  
cufflinks 33.132     High  
cufflinks 11.935     High  
cufflinks 7.009     High Low
cufflinks 26.793     High  
cufflinks 11.001     High Low
cufflinks 15.752     High  
cufflinks 32.745     High  

0 Strain