Gene : Sobic.004G047400 S. bicolor v3.1.1
Defline:  (1 of 1) 5.3.1.13 - Arabinose-5-phosphate isomerase / Phosphoarabinoisomerase Genomic Order:  496
Name:  ? Sobic.004G047400 Secondary Identifier:  ? PAC:37933075
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-1269 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G047400 0.5kb upstream 0.5kb upstream 4626 true Chr04: 3855391-3860016 Sorghum bicolor
Sobic.004G047400 0.5kb upstream 0.5kb upstream 500 false Chr04: 3855391-3855890 Sorghum bicolor
Sobic.004G047400 0.5kb downstream 0.5kb downstream 4626 true Chr04: 3855891-3860516 Sorghum bicolor
Sobic.004G047400 0.5kb downstream 0.5kb downstream 500 false Chr04: 3860017-3860516 Sorghum bicolor
Sobic.004G047400 1.0kb upstream 1.0kb upstream 5126 true Chr04: 3854891-3860016 Sorghum bicolor
Sobic.004G047400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3854891-3855890 Sorghum bicolor
Sobic.004G047400 1.0kb downstream 1.0kb downstream 5126 true Chr04: 3855891-3861016 Sorghum bicolor
Sobic.004G047400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3860017-3861016 Sorghum bicolor
Sobic.004G047400 2.0kb upstream 2.0kb upstream 6126 true Chr04: 3853891-3860016 Sorghum bicolor
Sobic.004G047400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3853891-3855890 Sorghum bicolor
Sobic.004G047400 2.0kb downstream 2.0kb downstream 6126 true Chr04: 3855891-3862016 Sorghum bicolor
Sobic.004G047400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3860017-3862016 Sorghum bicolor
Sobic.004G047400 5.0kb upstream 5.0kb upstream 9126 true Chr04: 3850891-3860016 Sorghum bicolor
Sobic.004G047400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3850891-3855890 Sorghum bicolor
Sobic.004G047400 5.0kb downstream 5.0kb downstream 9126 true Chr04: 3855891-3865016 Sorghum bicolor
Sobic.004G047400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3860017-3865016 Sorghum bicolor
Sobic.004G047400 10.0kb upstream 10.0kb upstream 14126 true Chr04: 3845891-3860016 Sorghum bicolor
Sobic.004G047400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3845891-3855890 Sorghum bicolor
Sobic.004G047400 10.0kb downstream 10.0kb downstream 14126 true Chr04: 3855891-3870016 Sorghum bicolor
Sobic.004G047400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3860017-3870016 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041154 5273 Angiosperm View MSA
122178842 5267 Panicoideae View MSA
124577036 5269 Grass View MSA
121347729 5274 Embryophyte View MSA
123423941 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.083        
cufflinks 1.875        
cufflinks 0.822       Low
cufflinks 1.098       Low
cufflinks 12.475       High
cufflinks 1.715        
cufflinks 14.464     High High
cufflinks 35.914     High High
cufflinks 3.208        
cufflinks 2.977        
cufflinks 1.844        
cufflinks 2.408        
cufflinks 5.685        
cufflinks 2.567        
cufflinks 6.004        
cufflinks 0.535       Low
cufflinks 15.636     High High
cufflinks 14.856     High High
cufflinks 1.408       Low
cufflinks 17.587     High High
cufflinks 3.369        
cufflinks 2.469        
cufflinks 2.451        
cufflinks 2.602        
cufflinks 0.742       Low
cufflinks 5.624        
cufflinks 4.114        
cufflinks 2.497        
cufflinks 35.186     High High
cufflinks 6.67        

0 Strain