Gene : Sobic.004G043600 S. bicolor v3.1.1
Defline:  (1 of 1) KOG4539 - Uncharacterized conserved protein Genomic Order:  457
Name:  ? Sobic.004G043600 Secondary Identifier:  ? PAC:37933084
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G043600 0.5kb upstream 0.5kb upstream 6031 true Chr04: 3598122-3604152 Sorghum bicolor
Sobic.004G043600 0.5kb upstream 0.5kb upstream 500 false Chr04: 3603653-3604152 Sorghum bicolor
Sobic.004G043600 0.5kb downstream 0.5kb downstream 6031 true Chr04: 3597622-3603652 Sorghum bicolor
Sobic.004G043600 0.5kb downstream 0.5kb downstream 500 false Chr04: 3597622-3598121 Sorghum bicolor
Sobic.004G043600 1.0kb upstream 1.0kb upstream 6531 true Chr04: 3598122-3604652 Sorghum bicolor
Sobic.004G043600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3603653-3604652 Sorghum bicolor
Sobic.004G043600 1.0kb downstream 1.0kb downstream 6531 true Chr04: 3597122-3603652 Sorghum bicolor
Sobic.004G043600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3597122-3598121 Sorghum bicolor
Sobic.004G043600 2.0kb upstream 2.0kb upstream 7531 true Chr04: 3598122-3605652 Sorghum bicolor
Sobic.004G043600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3603653-3605652 Sorghum bicolor
Sobic.004G043600 2.0kb downstream 2.0kb downstream 7531 true Chr04: 3596122-3603652 Sorghum bicolor
Sobic.004G043600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3596122-3598121 Sorghum bicolor
Sobic.004G043600 5.0kb upstream 5.0kb upstream 10531 true Chr04: 3598122-3608652 Sorghum bicolor
Sobic.004G043600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3603653-3608652 Sorghum bicolor
Sobic.004G043600 5.0kb downstream 5.0kb downstream 10531 true Chr04: 3593122-3603652 Sorghum bicolor
Sobic.004G043600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3593122-3598121 Sorghum bicolor
Sobic.004G043600 10.0kb upstream 10.0kb upstream 15531 true Chr04: 3598122-3613652 Sorghum bicolor
Sobic.004G043600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3603653-3613652 Sorghum bicolor
Sobic.004G043600 10.0kb downstream 10.0kb downstream 15531 true Chr04: 3588122-3603652 Sorghum bicolor
Sobic.004G043600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3588122-3598121 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192980 5267 Panicoideae View MSA
124590990 5269 Grass View MSA
122051099 5273 Angiosperm View MSA
121345467 5274 Embryophyte View MSA
123426588 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.056       High
cufflinks 0.34       Low
cufflinks 0.356       Low
cufflinks 0.863        
cufflinks 1.84        
cufflinks 2.173        
cufflinks 1.338        
cufflinks 0.51       Low
cufflinks 2.184        
cufflinks 2.63       High
cufflinks 1.539        
cufflinks 1.896        
cufflinks 1.768        
cufflinks 2.002        
cufflinks 1.471        
cufflinks 0.296       Low
cufflinks 1.182        
cufflinks 1.617        
cufflinks 0.367       Low
cufflinks 1.561        
cufflinks 3.378       High
cufflinks 2.486        
cufflinks 1.813        
cufflinks 1.924        
cufflinks 0.409       Low
cufflinks 0.386       Low
cufflinks 1.101        
cufflinks 0.589       Low
cufflinks 0.843        
cufflinks 1.69        

0 Strain