Gene : Sobic.004G040700 S. bicolor v3.1.1
Defline:  similar to Putative uncharacterized protein Genomic Order:  429
Name:  ? Sobic.004G040700 Secondary Identifier:  ? PAC:37929432
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G040700 0.5kb upstream 0.5kb upstream 3519 true Chr04: 3353205-3356723 Sorghum bicolor
Sobic.004G040700 0.5kb upstream 0.5kb upstream 500 false Chr04: 3353205-3353704 Sorghum bicolor
Sobic.004G040700 0.5kb downstream 0.5kb downstream 3519 true Chr04: 3353705-3357223 Sorghum bicolor
Sobic.004G040700 0.5kb downstream 0.5kb downstream 500 false Chr04: 3356724-3357223 Sorghum bicolor
Sobic.004G040700 1.0kb upstream 1.0kb upstream 4019 true Chr04: 3352705-3356723 Sorghum bicolor
Sobic.004G040700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3352705-3353704 Sorghum bicolor
Sobic.004G040700 1.0kb downstream 1.0kb downstream 4019 true Chr04: 3353705-3357723 Sorghum bicolor
Sobic.004G040700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3356724-3357723 Sorghum bicolor
Sobic.004G040700 2.0kb upstream 2.0kb upstream 5019 true Chr04: 3351705-3356723 Sorghum bicolor
Sobic.004G040700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3351705-3353704 Sorghum bicolor
Sobic.004G040700 2.0kb downstream 2.0kb downstream 5019 true Chr04: 3353705-3358723 Sorghum bicolor
Sobic.004G040700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3356724-3358723 Sorghum bicolor
Sobic.004G040700 5.0kb upstream 5.0kb upstream 8019 true Chr04: 3348705-3356723 Sorghum bicolor
Sobic.004G040700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3348705-3353704 Sorghum bicolor
Sobic.004G040700 5.0kb downstream 5.0kb downstream 8019 true Chr04: 3353705-3361723 Sorghum bicolor
Sobic.004G040700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3356724-3361723 Sorghum bicolor
Sobic.004G040700 10.0kb upstream 10.0kb upstream 13019 true Chr04: 3343705-3356723 Sorghum bicolor
Sobic.004G040700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3343705-3353704 Sorghum bicolor
Sobic.004G040700 10.0kb downstream 10.0kb downstream 13019 true Chr04: 3353705-3366723 Sorghum bicolor
Sobic.004G040700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3356724-3366723 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026252 5273 Angiosperm View MSA
122180883 5267 Panicoideae View MSA
124577065 5269 Grass View MSA
121296245 5274 Embryophyte View MSA
123334442 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.003        
cufflinks 0.734       Low
cufflinks 0.949        
cufflinks 0.755       Low
cufflinks 1.976       High
cufflinks 1.619        
cufflinks 1.153        
cufflinks 1.431        
cufflinks 1.932        
cufflinks 2.117       High
cufflinks 1.613        
cufflinks 1.64        
cufflinks 2.386       High
cufflinks 1.573        
cufflinks 2.277       High
cufflinks 0.955        
cufflinks 1.091        
cufflinks 1.1        
cufflinks 1.035        
cufflinks 1.479        
cufflinks 1.981       High
cufflinks 1.459        
cufflinks 1.538        
cufflinks 1.331        
cufflinks 0.82       Low
cufflinks 0.985        
cufflinks 1.524        
cufflinks 0.539       Low
cufflinks 1.224        
cufflinks 2.151       High

0 Strain