Gene : Sobic.004G039600 S. bicolor v3.1.1
Defline:  (1 of 1) K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) Genomic Order:  416
Name:  ? Sobic.004G039600 Secondary Identifier:  ? PAC:37932115
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G039600 0.5kb upstream 0.5kb upstream 8837 true Chr04: 3257041-3265877 Sorghum bicolor
Sobic.004G039600 0.5kb upstream 0.5kb upstream 500 false Chr04: 3257041-3257540 Sorghum bicolor
Sobic.004G039600 0.5kb downstream 0.5kb downstream 8837 true Chr04: 3257541-3266377 Sorghum bicolor
Sobic.004G039600 0.5kb downstream 0.5kb downstream 500 false Chr04: 3265878-3266377 Sorghum bicolor
Sobic.004G039600 1.0kb upstream 1.0kb upstream 9337 true Chr04: 3256541-3265877 Sorghum bicolor
Sobic.004G039600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3256541-3257540 Sorghum bicolor
Sobic.004G039600 1.0kb downstream 1.0kb downstream 9337 true Chr04: 3257541-3266877 Sorghum bicolor
Sobic.004G039600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3265878-3266877 Sorghum bicolor
Sobic.004G039600 2.0kb upstream 2.0kb upstream 10337 true Chr04: 3255541-3265877 Sorghum bicolor
Sobic.004G039600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3255541-3257540 Sorghum bicolor
Sobic.004G039600 2.0kb downstream 2.0kb downstream 10337 true Chr04: 3257541-3267877 Sorghum bicolor
Sobic.004G039600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3265878-3267877 Sorghum bicolor
Sobic.004G039600 5.0kb upstream 5.0kb upstream 13337 true Chr04: 3252541-3265877 Sorghum bicolor
Sobic.004G039600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3252541-3257540 Sorghum bicolor
Sobic.004G039600 5.0kb downstream 5.0kb downstream 13337 true Chr04: 3257541-3270877 Sorghum bicolor
Sobic.004G039600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3265878-3270877 Sorghum bicolor
Sobic.004G039600 10.0kb upstream 10.0kb upstream 18337 true Chr04: 3247541-3265877 Sorghum bicolor
Sobic.004G039600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3247541-3257540 Sorghum bicolor
Sobic.004G039600 10.0kb downstream 10.0kb downstream 18337 true Chr04: 3257541-3275877 Sorghum bicolor
Sobic.004G039600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3265878-3275877 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187516 5267 Panicoideae View MSA
124569957 5269 Grass View MSA
122042231 5273 Angiosperm View MSA
123428994 5275 Viridiplantae View MSA
121346933 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 72.437     High  
cufflinks 12.597     High Low
cufflinks 22.98     High Low
cufflinks 28.718     High  
cufflinks 54.934     High  
cufflinks 24.851     High  
cufflinks 39.412     High  
cufflinks 17.324     High Low
cufflinks 59.803     High  
cufflinks 61.072     High  
cufflinks 62.875     High  
cufflinks 64.071     High  
cufflinks 44.391     High  
cufflinks 69.089     High  
cufflinks 40.392     High  
cufflinks 24.363     High Low
cufflinks 39.256     High  
cufflinks 40.574     High  
cufflinks 21.264     High Low
cufflinks 41.376     High  
cufflinks 63.914     High  
cufflinks 75.747     High High
cufflinks 77.184     High High
cufflinks 80.049     High High
cufflinks 22.949     High Low
cufflinks 12.8     High Low
cufflinks 57.014     High  
cufflinks 44.672     High  
cufflinks 33.572     High  
cufflinks 54.693     High  

0 Strain