Gene : Sobic.004G084300 S. bicolor v3.1.1
Defline:  (1 of 1) K11324 - DNA methyltransferase 1-associated protein 1 (DMAP1, SWC4, EAF2) Genomic Order:  874
Name:  ? Sobic.004G084300 Secondary Identifier:  ? PAC:37932624
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G084300 0.5kb upstream 0.5kb upstream 8378 true Chr04: 6995571-7003948 Sorghum bicolor
Sobic.004G084300 0.5kb upstream 0.5kb upstream 500 false Chr04: 6995571-6996070 Sorghum bicolor
Sobic.004G084300 0.5kb downstream 0.5kb downstream 8378 true Chr04: 6996071-7004448 Sorghum bicolor
Sobic.004G084300 0.5kb downstream 0.5kb downstream 500 false Chr04: 7003949-7004448 Sorghum bicolor
Sobic.004G084300 1.0kb upstream 1.0kb upstream 8878 true Chr04: 6995071-7003948 Sorghum bicolor
Sobic.004G084300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6995071-6996070 Sorghum bicolor
Sobic.004G084300 1.0kb downstream 1.0kb downstream 8878 true Chr04: 6996071-7004948 Sorghum bicolor
Sobic.004G084300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 7003949-7004948 Sorghum bicolor
Sobic.004G084300 2.0kb upstream 2.0kb upstream 9878 true Chr04: 6994071-7003948 Sorghum bicolor
Sobic.004G084300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6994071-6996070 Sorghum bicolor
Sobic.004G084300 2.0kb downstream 2.0kb downstream 9878 true Chr04: 6996071-7005948 Sorghum bicolor
Sobic.004G084300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 7003949-7005948 Sorghum bicolor
Sobic.004G084300 5.0kb upstream 5.0kb upstream 12878 true Chr04: 6991071-7003948 Sorghum bicolor
Sobic.004G084300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6991071-6996070 Sorghum bicolor
Sobic.004G084300 5.0kb downstream 5.0kb downstream 12878 true Chr04: 6996071-7008948 Sorghum bicolor
Sobic.004G084300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 7003949-7008948 Sorghum bicolor
Sobic.004G084300 10.0kb upstream 10.0kb upstream 17878 true Chr04: 6986071-7003948 Sorghum bicolor
Sobic.004G084300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6986071-6996070 Sorghum bicolor
Sobic.004G084300 10.0kb downstream 10.0kb downstream 17878 true Chr04: 6996071-7013948 Sorghum bicolor
Sobic.004G084300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 7003949-7013948 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175446 5267 Panicoideae View MSA
124580157 5269 Grass View MSA
122041546 5273 Angiosperm View MSA
123429045 5275 Viridiplantae View MSA
121347026 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.834        
cufflinks 3.117       Low
cufflinks 3.217       Low
cufflinks 4.546        
cufflinks 4.025        
cufflinks 6.242       High
cufflinks 3.721        
cufflinks 2.911       Low
cufflinks 5.159       High
cufflinks 5.415       High
cufflinks 3.725        
cufflinks 3.689        
cufflinks 4.222        
cufflinks 3.571        
cufflinks 4.011        
cufflinks 3.505        
cufflinks 4.097        
cufflinks 4.544        
cufflinks 2.943       Low
cufflinks 4.48        
cufflinks 6.929       High
cufflinks 4.503        
cufflinks 3.808        
cufflinks 3.602        
cufflinks 3.967        
cufflinks 2.731       Low
cufflinks 3.487        
cufflinks 6.775       High
cufflinks 3.73        
cufflinks 4.441        

0 Strain