Gene : Sobic.004G081800 S. bicolor v3.1.1
Defline:  (1 of 1) K11885 - DNA damage-inducible protein 1 (DDI1) Genomic Order:  848
Name:  ? Sobic.004G081800 Secondary Identifier:  ? PAC:37933571
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G081800 0.5kb upstream 0.5kb upstream 6118 true Chr04: 6703499-6709616 Sorghum bicolor
Sobic.004G081800 0.5kb upstream 0.5kb upstream 500 false Chr04: 6703499-6703998 Sorghum bicolor
Sobic.004G081800 0.5kb downstream 0.5kb downstream 6118 true Chr04: 6703999-6710116 Sorghum bicolor
Sobic.004G081800 0.5kb downstream 0.5kb downstream 500 false Chr04: 6709617-6710116 Sorghum bicolor
Sobic.004G081800 1.0kb upstream 1.0kb upstream 6618 true Chr04: 6702999-6709616 Sorghum bicolor
Sobic.004G081800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6702999-6703998 Sorghum bicolor
Sobic.004G081800 1.0kb downstream 1.0kb downstream 6618 true Chr04: 6703999-6710616 Sorghum bicolor
Sobic.004G081800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6709617-6710616 Sorghum bicolor
Sobic.004G081800 2.0kb upstream 2.0kb upstream 7618 true Chr04: 6701999-6709616 Sorghum bicolor
Sobic.004G081800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6701999-6703998 Sorghum bicolor
Sobic.004G081800 2.0kb downstream 2.0kb downstream 7618 true Chr04: 6703999-6711616 Sorghum bicolor
Sobic.004G081800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6709617-6711616 Sorghum bicolor
Sobic.004G081800 5.0kb upstream 5.0kb upstream 10618 true Chr04: 6698999-6709616 Sorghum bicolor
Sobic.004G081800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6698999-6703998 Sorghum bicolor
Sobic.004G081800 5.0kb downstream 5.0kb downstream 10618 true Chr04: 6703999-6714616 Sorghum bicolor
Sobic.004G081800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6709617-6714616 Sorghum bicolor
Sobic.004G081800 10.0kb upstream 10.0kb upstream 15618 true Chr04: 6693999-6709616 Sorghum bicolor
Sobic.004G081800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6693999-6703998 Sorghum bicolor
Sobic.004G081800 10.0kb downstream 10.0kb downstream 15618 true Chr04: 6703999-6719616 Sorghum bicolor
Sobic.004G081800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6709617-6719616 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185673 5267 Panicoideae View MSA
124575071 5269 Grass View MSA
122047571 5273 Angiosperm View MSA
121343926 5274 Embryophyte View MSA
123424063 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.243        
cufflinks 3.542       Low
cufflinks 10.178     High  
cufflinks 13.781     High  
cufflinks 11.157        
cufflinks 8.251        
cufflinks 11.95     High  
cufflinks 5.529       Low
cufflinks 12.429     High  
cufflinks 13.903     High  
cufflinks 18.216     High  
cufflinks 19.934     High High
cufflinks 10.876        
cufflinks 20.976     High High
cufflinks 10.546        
cufflinks 7.848        
cufflinks 13.038     High  
cufflinks 13.667     High  
cufflinks 6.723       Low
cufflinks 16.059     High  
cufflinks 7.078       Low
cufflinks 22.395     High High
cufflinks 22.294     High High
cufflinks 21.966     High High
cufflinks 6.882       Low
cufflinks 3.539       Low
cufflinks 16.783     High  
cufflinks 13.6     High  
cufflinks 11.396        
cufflinks 11.364        

0 Strain