Gene : Sobic.004G080300 S. bicolor v3.1.1
Defline:  (1 of 81) PF03514 - GRAS domain family (GRAS) Genomic Order:  832
Name:  ? Sobic.004G080300 Secondary Identifier:  ? PAC:37933109
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G080300 0.5kb upstream 0.5kb upstream 6081 true Chr04: 6598882-6604962 Sorghum bicolor
Sobic.004G080300 0.5kb upstream 0.5kb upstream 500 false Chr04: 6604463-6604962 Sorghum bicolor
Sobic.004G080300 0.5kb downstream 0.5kb downstream 6081 true Chr04: 6598382-6604462 Sorghum bicolor
Sobic.004G080300 0.5kb downstream 0.5kb downstream 500 false Chr04: 6598382-6598881 Sorghum bicolor
Sobic.004G080300 1.0kb upstream 1.0kb upstream 6581 true Chr04: 6598882-6605462 Sorghum bicolor
Sobic.004G080300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6604463-6605462 Sorghum bicolor
Sobic.004G080300 1.0kb downstream 1.0kb downstream 6581 true Chr04: 6597882-6604462 Sorghum bicolor
Sobic.004G080300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6597882-6598881 Sorghum bicolor
Sobic.004G080300 2.0kb upstream 2.0kb upstream 7581 true Chr04: 6598882-6606462 Sorghum bicolor
Sobic.004G080300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6604463-6606462 Sorghum bicolor
Sobic.004G080300 2.0kb downstream 2.0kb downstream 7581 true Chr04: 6596882-6604462 Sorghum bicolor
Sobic.004G080300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6596882-6598881 Sorghum bicolor
Sobic.004G080300 5.0kb upstream 5.0kb upstream 10581 true Chr04: 6598882-6609462 Sorghum bicolor
Sobic.004G080300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6604463-6609462 Sorghum bicolor
Sobic.004G080300 5.0kb downstream 5.0kb downstream 10581 true Chr04: 6593882-6604462 Sorghum bicolor
Sobic.004G080300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6593882-6598881 Sorghum bicolor
Sobic.004G080300 10.0kb upstream 10.0kb upstream 15581 true Chr04: 6598882-6614462 Sorghum bicolor
Sobic.004G080300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6604463-6614462 Sorghum bicolor
Sobic.004G080300 10.0kb downstream 10.0kb downstream 15581 true Chr04: 6588882-6604462 Sorghum bicolor
Sobic.004G080300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6588882-6598881 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179462 5267 Panicoideae View MSA
124585376 5269 Grass View MSA
122041925 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.042     Low  
cufflinks 0.007     Low Low
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.112        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low  
cufflinks 0.005     Low Low
cufflinks 0.027     Low  
cufflinks 0.006     Low Low
cufflinks 0.464       High
cufflinks 0.279       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.448       High
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  
cufflinks 0.033     Low  
cufflinks 0.009     Low Low
cufflinks 0.03     Low  
cufflinks 0.284       High
cufflinks 0.17        
cufflinks 0.225        
cufflinks 0.236       High
cufflinks 0.013     Low  
cufflinks 0.006     Low Low
cufflinks 0.207        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.06     Low  
cufflinks 0.012     Low  

0 Strain