Gene : Sobic.004G079900 S. bicolor v3.1.1
Defline:  (1 of 4) 3.6.3.4//3.6.3.54 - Cu(2+)-exporting ATPase // Cu(+) exporting ATPase Genomic Order:  828
Name:  ? Sobic.004G079900 Secondary Identifier:  ? PAC:37931957
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G079900 0.5kb upstream 0.5kb upstream 6115 true Chr04: 6568817-6574931 Sorghum bicolor
Sobic.004G079900 0.5kb upstream 0.5kb upstream 500 false Chr04: 6568817-6569316 Sorghum bicolor
Sobic.004G079900 0.5kb downstream 0.5kb downstream 6115 true Chr04: 6569317-6575431 Sorghum bicolor
Sobic.004G079900 0.5kb downstream 0.5kb downstream 500 false Chr04: 6574932-6575431 Sorghum bicolor
Sobic.004G079900 1.0kb upstream 1.0kb upstream 6615 true Chr04: 6568317-6574931 Sorghum bicolor
Sobic.004G079900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6568317-6569316 Sorghum bicolor
Sobic.004G079900 1.0kb downstream 1.0kb downstream 6615 true Chr04: 6569317-6575931 Sorghum bicolor
Sobic.004G079900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6574932-6575931 Sorghum bicolor
Sobic.004G079900 2.0kb upstream 2.0kb upstream 7615 true Chr04: 6567317-6574931 Sorghum bicolor
Sobic.004G079900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6567317-6569316 Sorghum bicolor
Sobic.004G079900 2.0kb downstream 2.0kb downstream 7615 true Chr04: 6569317-6576931 Sorghum bicolor
Sobic.004G079900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6574932-6576931 Sorghum bicolor
Sobic.004G079900 5.0kb upstream 5.0kb upstream 10615 true Chr04: 6564317-6574931 Sorghum bicolor
Sobic.004G079900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6564317-6569316 Sorghum bicolor
Sobic.004G079900 5.0kb downstream 5.0kb downstream 10615 true Chr04: 6569317-6579931 Sorghum bicolor
Sobic.004G079900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6574932-6579931 Sorghum bicolor
Sobic.004G079900 10.0kb upstream 10.0kb upstream 15615 true Chr04: 6559317-6574931 Sorghum bicolor
Sobic.004G079900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6559317-6569316 Sorghum bicolor
Sobic.004G079900 10.0kb downstream 10.0kb downstream 15615 true Chr04: 6569317-6584931 Sorghum bicolor
Sobic.004G079900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6574932-6584931 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179973 5267 Panicoideae View MSA
124569683 5269 Grass View MSA
122042760 5273 Angiosperm View MSA
121351146 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.889        
cufflinks 1.864       Low
cufflinks 2.105       Low
cufflinks 2.994       Low
cufflinks 10.843        
cufflinks 3.232       Low
cufflinks 6.988        
cufflinks 8.689     High  
cufflinks 11.463        
cufflinks 10.328        
cufflinks 32.756     High High
cufflinks 30.989     High High
cufflinks 11.821     High  
cufflinks 107.135     High High
cufflinks 13.737     High  
cufflinks 1.941       Low
cufflinks 5.775        
cufflinks 6.455        
cufflinks 2.827       Low
cufflinks 6.755        
cufflinks 12.274        
cufflinks 13.227     High  
cufflinks 29.778     High High
cufflinks 34.657     High High
cufflinks 2.255       Low
cufflinks 4.088        
cufflinks 37.02     High High
cufflinks 3.511        
cufflinks 7.674        
cufflinks 9.842        

0 Strain