Gene : Sobic.004G077800 S. bicolor v3.1.1
Defline:  (1 of 1) K03027 - DNA-directed RNA polymerases I and III subunit RPAC1 (RPC40, POLR1C) Genomic Order:  807
Name:  ? Sobic.004G077800 Secondary Identifier:  ? PAC:37930334
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G077800 0.5kb upstream 0.5kb upstream 5248 true Chr04: 6401334-6406581 Sorghum bicolor
Sobic.004G077800 0.5kb upstream 0.5kb upstream 500 false Chr04: 6406082-6406581 Sorghum bicolor
Sobic.004G077800 0.5kb downstream 0.5kb downstream 5248 true Chr04: 6400834-6406081 Sorghum bicolor
Sobic.004G077800 0.5kb downstream 0.5kb downstream 500 false Chr04: 6400834-6401333 Sorghum bicolor
Sobic.004G077800 1.0kb upstream 1.0kb upstream 5748 true Chr04: 6401334-6407081 Sorghum bicolor
Sobic.004G077800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6406082-6407081 Sorghum bicolor
Sobic.004G077800 1.0kb downstream 1.0kb downstream 5748 true Chr04: 6400334-6406081 Sorghum bicolor
Sobic.004G077800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6400334-6401333 Sorghum bicolor
Sobic.004G077800 2.0kb upstream 2.0kb upstream 6748 true Chr04: 6401334-6408081 Sorghum bicolor
Sobic.004G077800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6406082-6408081 Sorghum bicolor
Sobic.004G077800 2.0kb downstream 2.0kb downstream 6748 true Chr04: 6399334-6406081 Sorghum bicolor
Sobic.004G077800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6399334-6401333 Sorghum bicolor
Sobic.004G077800 5.0kb upstream 5.0kb upstream 9748 true Chr04: 6401334-6411081 Sorghum bicolor
Sobic.004G077800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6406082-6411081 Sorghum bicolor
Sobic.004G077800 5.0kb downstream 5.0kb downstream 9748 true Chr04: 6396334-6406081 Sorghum bicolor
Sobic.004G077800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6396334-6401333 Sorghum bicolor
Sobic.004G077800 10.0kb upstream 10.0kb upstream 14748 true Chr04: 6401334-6416081 Sorghum bicolor
Sobic.004G077800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6406082-6416081 Sorghum bicolor
Sobic.004G077800 10.0kb downstream 10.0kb downstream 14748 true Chr04: 6391334-6406081 Sorghum bicolor
Sobic.004G077800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6391334-6401333 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185899 5267 Panicoideae View MSA
124573072 5269 Grass View MSA
122043698 5273 Angiosperm View MSA
121344052 5274 Embryophyte View MSA
123424148 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.186       High
cufflinks 0.661       Low
cufflinks 1.593        
cufflinks 2.279        
cufflinks 3.387        
cufflinks 2.114        
cufflinks 2.82        
cufflinks 1.334       Low
cufflinks 2.463        
cufflinks 2.64        
cufflinks 3.93        
cufflinks 4.015        
cufflinks 2.276        
cufflinks 5.041        
cufflinks 2.062        
cufflinks 1.073       Low
cufflinks 3.302        
cufflinks 3.716        
cufflinks 1.011       Low
cufflinks 3.384        
cufflinks 4.61        
cufflinks 5.729       High
cufflinks 5.617       High
cufflinks 5.62       High
cufflinks 0.969       Low
cufflinks 0.819       Low
cufflinks 3.087        
cufflinks 1.705        
cufflinks 2.248        
cufflinks 3.895        

0 Strain