Gene : Sobic.004G076732 S. bicolor v3.1.1
Defline:  (1 of 3) K14800 - pre-rRNA-processing protein TSR2 (TSR2) Genomic Order:  795
Name:  ? Sobic.004G076732 Secondary Identifier:  ? PAC:37932881
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G076732 0.5kb upstream 0.5kb upstream 906 true Chr04: 6327222-6328127 Sorghum bicolor
Sobic.004G076732 0.5kb upstream 0.5kb upstream 500 false Chr04: 6327628-6328127 Sorghum bicolor
Sobic.004G076732 0.5kb downstream 0.5kb downstream 906 true Chr04: 6326722-6327627 Sorghum bicolor
Sobic.004G076732 0.5kb downstream 0.5kb downstream 500 false Chr04: 6326722-6327221 Sorghum bicolor
Sobic.004G076732 1.0kb upstream 1.0kb upstream 1406 true Chr04: 6327222-6328627 Sorghum bicolor
Sobic.004G076732 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6327628-6328627 Sorghum bicolor
Sobic.004G076732 1.0kb downstream 1.0kb downstream 1406 true Chr04: 6326222-6327627 Sorghum bicolor
Sobic.004G076732 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6326222-6327221 Sorghum bicolor
Sobic.004G076732 2.0kb upstream 2.0kb upstream 2406 true Chr04: 6327222-6329627 Sorghum bicolor
Sobic.004G076732 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6327628-6329627 Sorghum bicolor
Sobic.004G076732 2.0kb downstream 2.0kb downstream 2406 true Chr04: 6325222-6327627 Sorghum bicolor
Sobic.004G076732 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6325222-6327221 Sorghum bicolor
Sobic.004G076732 5.0kb upstream 5.0kb upstream 5406 true Chr04: 6327222-6332627 Sorghum bicolor
Sobic.004G076732 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6327628-6332627 Sorghum bicolor
Sobic.004G076732 5.0kb downstream 5.0kb downstream 5406 true Chr04: 6322222-6327627 Sorghum bicolor
Sobic.004G076732 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6322222-6327221 Sorghum bicolor
Sobic.004G076732 10.0kb upstream 10.0kb upstream 10406 true Chr04: 6327222-6337627 Sorghum bicolor
Sobic.004G076732 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6327628-6337627 Sorghum bicolor
Sobic.004G076732 10.0kb downstream 10.0kb downstream 10406 true Chr04: 6317222-6327627 Sorghum bicolor
Sobic.004G076732 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6317222-6327221 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029524 5273 Angiosperm View MSA
122197851 5267 Panicoideae View MSA
124585578 5269 Grass View MSA
121298842 5274 Embryophyte View MSA
123336784 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.05     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.046     Low  
cufflinks 0.065     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.056     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.039     Low Low

0 Strain