Gene : Sobic.004G068300 S. bicolor v3.1.1

Defline:  (1 of 14) K01507 - inorganic pyrophosphatase (ppa) Genomic Order:  706
Name:  ? Sobic.004G068300 Secondary Identifier:  ? PAC:37929840

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G068300 0.5kb upstream 0.5kb upstream 7006 true Chr04: 5552126-5559131 Sorghum bicolor
Sobic.004G068300 0.5kb upstream 0.5kb upstream 500 false Chr04: 5558632-5559131 Sorghum bicolor
Sobic.004G068300 0.5kb downstream 0.5kb downstream 7006 true Chr04: 5551626-5558631 Sorghum bicolor
Sobic.004G068300 0.5kb downstream 0.5kb downstream 500 false Chr04: 5551626-5552125 Sorghum bicolor
Sobic.004G068300 1.0kb upstream 1.0kb upstream 7506 true Chr04: 5552126-5559631 Sorghum bicolor
Sobic.004G068300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5558632-5559631 Sorghum bicolor
Sobic.004G068300 1.0kb downstream 1.0kb downstream 7506 true Chr04: 5551126-5558631 Sorghum bicolor
Sobic.004G068300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5551126-5552125 Sorghum bicolor
Sobic.004G068300 2.0kb upstream 2.0kb upstream 8506 true Chr04: 5552126-5560631 Sorghum bicolor
Sobic.004G068300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5558632-5560631 Sorghum bicolor
Sobic.004G068300 2.0kb downstream 2.0kb downstream 8506 true Chr04: 5550126-5558631 Sorghum bicolor
Sobic.004G068300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5550126-5552125 Sorghum bicolor
Sobic.004G068300 5.0kb upstream 5.0kb upstream 11506 true Chr04: 5552126-5563631 Sorghum bicolor
Sobic.004G068300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5558632-5563631 Sorghum bicolor
Sobic.004G068300 5.0kb downstream 5.0kb downstream 11506 true Chr04: 5547126-5558631 Sorghum bicolor
Sobic.004G068300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5547126-5552125 Sorghum bicolor
Sobic.004G068300 10.0kb upstream 10.0kb upstream 16506 true Chr04: 5552126-5568631 Sorghum bicolor
Sobic.004G068300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5558632-5568631 Sorghum bicolor
Sobic.004G068300 10.0kb downstream 10.0kb downstream 16506 true Chr04: 5542126-5558631 Sorghum bicolor
Sobic.004G068300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5542126-5552125 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192957 5267 Panicoideae View MSA
124584491 5269 Grass View MSA
122044942 5273 Angiosperm View MSA
121349736 5274 Embryophyte View MSA
123426628 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.41     High  
cufflinks 73.611     High  
cufflinks 34.08     High  
cufflinks 22.717     High  
cufflinks 16.132     High  
cufflinks 29.072     High  
cufflinks 92.641     High High
cufflinks 246.604     High High
cufflinks 28.409     High  
cufflinks 31.643     High  
cufflinks 6.439       Low
cufflinks 17.526     High  
cufflinks 32.356     High  
cufflinks 7.294       Low
cufflinks 48.021     High  
cufflinks 68.661     High  
cufflinks 80.156     High High
cufflinks 101.192     High High
cufflinks 93.598     High High
cufflinks 41.955     High  
cufflinks 12.434        
cufflinks 5.604       Low
cufflinks 9.329       Low
cufflinks 9.679        
cufflinks 76.268     High  
cufflinks 177.042     High High
cufflinks 14.993     High  
cufflinks 10.708     High  
cufflinks 125.198     High High
cufflinks 53.009     High  

0 Strain