Gene : Sobic.004G119200 S. bicolor v3.1.1
Defline:  (1 of 2) K12832 - splicing factor 3B subunit 5 (SF3B5, SF3B10) Genomic Order:  1234
Name:  ? Sobic.004G119200 Secondary Identifier:  ? PAC:37930902
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G119200 0.5kb upstream 0.5kb upstream 4051 true Chr04: 12704662-12708712 Sorghum bicolor
Sobic.004G119200 0.5kb upstream 0.5kb upstream 500 false Chr04: 12704662-12705161 Sorghum bicolor
Sobic.004G119200 0.5kb downstream 0.5kb downstream 4051 true Chr04: 12705162-12709212 Sorghum bicolor
Sobic.004G119200 0.5kb downstream 0.5kb downstream 500 false Chr04: 12708713-12709212 Sorghum bicolor
Sobic.004G119200 1.0kb upstream 1.0kb upstream 4551 true Chr04: 12704162-12708712 Sorghum bicolor
Sobic.004G119200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 12704162-12705161 Sorghum bicolor
Sobic.004G119200 1.0kb downstream 1.0kb downstream 4551 true Chr04: 12705162-12709712 Sorghum bicolor
Sobic.004G119200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 12708713-12709712 Sorghum bicolor
Sobic.004G119200 2.0kb upstream 2.0kb upstream 5551 true Chr04: 12703162-12708712 Sorghum bicolor
Sobic.004G119200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 12703162-12705161 Sorghum bicolor
Sobic.004G119200 2.0kb downstream 2.0kb downstream 5551 true Chr04: 12705162-12710712 Sorghum bicolor
Sobic.004G119200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 12708713-12710712 Sorghum bicolor
Sobic.004G119200 5.0kb upstream 5.0kb upstream 8551 true Chr04: 12700162-12708712 Sorghum bicolor
Sobic.004G119200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 12700162-12705161 Sorghum bicolor
Sobic.004G119200 5.0kb downstream 5.0kb downstream 8551 true Chr04: 12705162-12713712 Sorghum bicolor
Sobic.004G119200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 12708713-12713712 Sorghum bicolor
Sobic.004G119200 10.0kb upstream 10.0kb upstream 13551 true Chr04: 12695162-12708712 Sorghum bicolor
Sobic.004G119200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 12695162-12705161 Sorghum bicolor
Sobic.004G119200 10.0kb downstream 10.0kb downstream 13551 true Chr04: 12705162-12718712 Sorghum bicolor
Sobic.004G119200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 12708713-12718712 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027648 5273 Angiosperm View MSA
122199156 5267 Panicoideae View MSA
124576348 5269 Grass View MSA
123428927 5275 Viridiplantae View MSA
121347588 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.65     High High
cufflinks 3.15       Low
cufflinks 14.0     High  
cufflinks 25.617     High High
cufflinks 13.166     High  
cufflinks 20.662     High High
cufflinks 8.9        
cufflinks 3.351       Low
cufflinks 21.01     High High
cufflinks 21.589     High High
cufflinks 8.337        
cufflinks 8.527        
cufflinks 13.504     High  
cufflinks 8.994        
cufflinks 12.626     High  
cufflinks 9.428        
cufflinks 10.88        
cufflinks 11.108        
cufflinks 6.782        
cufflinks 16.003     High  
cufflinks 15.579     High  
cufflinks 11.59        
cufflinks 9.967        
cufflinks 9.602        
cufflinks 5.648       Low
cufflinks 2.344       Low
cufflinks 12.365     High  
cufflinks 40.351     High High
cufflinks 5.442       Low
cufflinks 12.588     High  

0 Strain