Gene : Sobic.009G001500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11071//PTHR11071:SF11 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C Genomic Order:  15
Name:  ? Sobic.009G001500 Secondary Identifier:  ? PAC:37921168
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G001500 0.5kb upstream 0.5kb upstream 3518 true Chr09: 162654-166171 Sorghum bicolor
Sobic.009G001500 0.5kb upstream 0.5kb upstream 500 false Chr09: 162654-163153 Sorghum bicolor
Sobic.009G001500 0.5kb downstream 0.5kb downstream 3518 true Chr09: 163154-166671 Sorghum bicolor
Sobic.009G001500 0.5kb downstream 0.5kb downstream 500 false Chr09: 166172-166671 Sorghum bicolor
Sobic.009G001500 1.0kb upstream 1.0kb upstream 4018 true Chr09: 162154-166171 Sorghum bicolor
Sobic.009G001500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 162154-163153 Sorghum bicolor
Sobic.009G001500 1.0kb downstream 1.0kb downstream 4018 true Chr09: 163154-167171 Sorghum bicolor
Sobic.009G001500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 166172-167171 Sorghum bicolor
Sobic.009G001500 2.0kb upstream 2.0kb upstream 5018 true Chr09: 161154-166171 Sorghum bicolor
Sobic.009G001500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 161154-163153 Sorghum bicolor
Sobic.009G001500 2.0kb downstream 2.0kb downstream 5018 true Chr09: 163154-168171 Sorghum bicolor
Sobic.009G001500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 166172-168171 Sorghum bicolor
Sobic.009G001500 5.0kb upstream 5.0kb upstream 8018 true Chr09: 158154-166171 Sorghum bicolor
Sobic.009G001500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 158154-163153 Sorghum bicolor
Sobic.009G001500 5.0kb downstream 5.0kb downstream 8018 true Chr09: 163154-171171 Sorghum bicolor
Sobic.009G001500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 166172-171171 Sorghum bicolor
Sobic.009G001500 10.0kb upstream 10.0kb upstream 13018 true Chr09: 153154-166171 Sorghum bicolor
Sobic.009G001500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 153154-163153 Sorghum bicolor
Sobic.009G001500 10.0kb downstream 10.0kb downstream 13018 true Chr09: 163154-176171 Sorghum bicolor
Sobic.009G001500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 166172-176171 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194800 5267 Panicoideae View MSA
124569768 5269 Grass View MSA
122048638 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121349242 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.892     High  
cufflinks 112.683     High High
cufflinks 48.242     High  
cufflinks 37.47     High  
cufflinks 34.907     High  
cufflinks 58.934     High  
cufflinks 121.946     High High
cufflinks 197.212     High High
cufflinks 22.524     High  
cufflinks 27.264     High  
cufflinks 12.853     High Low
cufflinks 10.089       Low
cufflinks 17.959     High  
cufflinks 15.142     High Low
cufflinks 45.454     High  
cufflinks 62.89     High  
cufflinks 129.16     High High
cufflinks 165.939     High High
cufflinks 53.272     High  
cufflinks 38.366     High  
cufflinks 32.82     High  
cufflinks 21.756     High  
cufflinks 16.051     High Low
cufflinks 17.075     High  
cufflinks 14.314     High Low
cufflinks 95.861     High High
cufflinks 16.74     High  
cufflinks 39.892     High  
cufflinks 281.436     High High
cufflinks 47.544     High  

0 Strain