Gene : Sobic.004G111700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10159//PTHR10159:SF335 - DUAL SPECIFICITY PROTEIN PHOSPHATASE // SUBFAMILY NOT NAMED Genomic Order:  1158
Name:  ? Sobic.004G111700 Secondary Identifier:  ? PAC:37931023
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G111700 0.5kb upstream 0.5kb upstream 3553 true Chr04: 11031812-11035364 Sorghum bicolor
Sobic.004G111700 0.5kb upstream 0.5kb upstream 500 false Chr04: 11031812-11032311 Sorghum bicolor
Sobic.004G111700 0.5kb downstream 0.5kb downstream 3553 true Chr04: 11032312-11035864 Sorghum bicolor
Sobic.004G111700 0.5kb downstream 0.5kb downstream 500 false Chr04: 11035365-11035864 Sorghum bicolor
Sobic.004G111700 1.0kb upstream 1.0kb upstream 4053 true Chr04: 11031312-11035364 Sorghum bicolor
Sobic.004G111700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 11031312-11032311 Sorghum bicolor
Sobic.004G111700 1.0kb downstream 1.0kb downstream 4053 true Chr04: 11032312-11036364 Sorghum bicolor
Sobic.004G111700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 11035365-11036364 Sorghum bicolor
Sobic.004G111700 2.0kb upstream 2.0kb upstream 5053 true Chr04: 11030312-11035364 Sorghum bicolor
Sobic.004G111700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 11030312-11032311 Sorghum bicolor
Sobic.004G111700 2.0kb downstream 2.0kb downstream 5053 true Chr04: 11032312-11037364 Sorghum bicolor
Sobic.004G111700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 11035365-11037364 Sorghum bicolor
Sobic.004G111700 5.0kb upstream 5.0kb upstream 8053 true Chr04: 11027312-11035364 Sorghum bicolor
Sobic.004G111700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 11027312-11032311 Sorghum bicolor
Sobic.004G111700 5.0kb downstream 5.0kb downstream 8053 true Chr04: 11032312-11040364 Sorghum bicolor
Sobic.004G111700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 11035365-11040364 Sorghum bicolor
Sobic.004G111700 10.0kb upstream 10.0kb upstream 13053 true Chr04: 11022312-11035364 Sorghum bicolor
Sobic.004G111700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 11022312-11032311 Sorghum bicolor
Sobic.004G111700 10.0kb downstream 10.0kb downstream 13053 true Chr04: 11032312-11045364 Sorghum bicolor
Sobic.004G111700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 11035365-11045364 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028012 5273 Angiosperm View MSA
122184633 5267 Panicoideae View MSA
124580391 5269 Grass View MSA
121297567 5274 Embryophyte View MSA
123335609 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.648        
cufflinks 1.356        
cufflinks 1.748        
cufflinks 2.032        
cufflinks 1.387        
cufflinks 4.819       High
cufflinks 1.145        
cufflinks 1.18        
cufflinks 2.05        
cufflinks 1.973        
cufflinks 0.825       Low
cufflinks 1.149        
cufflinks 2.143        
cufflinks 0.844        
cufflinks 2.809       High
cufflinks 1.93        
cufflinks 1.023        
cufflinks 1.164        
cufflinks 1.448        
cufflinks 1.37        
cufflinks 2.532       High
cufflinks 0.905        
cufflinks 0.823       Low
cufflinks 0.747       Low
cufflinks 1.528        
cufflinks 1.078        
cufflinks 1.082        
cufflinks 2.55       High
cufflinks 1.363        
cufflinks 2.303       High

0 Strain