Gene : Sobic.004G107500 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR10217//PTHR10217:SF520 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // SUBFAMILY NOT NAMED Genomic Order:  1117
Name:  ? Sobic.004G107500 Secondary Identifier:  ? PAC:37929059
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G107500 0.5kb upstream 0.5kb upstream 4675 true Chr04: 10294373-10299047 Sorghum bicolor
Sobic.004G107500 0.5kb upstream 0.5kb upstream 500 false Chr04: 10298548-10299047 Sorghum bicolor
Sobic.004G107500 0.5kb downstream 0.5kb downstream 4675 true Chr04: 10293873-10298547 Sorghum bicolor
Sobic.004G107500 0.5kb downstream 0.5kb downstream 500 false Chr04: 10293873-10294372 Sorghum bicolor
Sobic.004G107500 1.0kb upstream 1.0kb upstream 5175 true Chr04: 10294373-10299547 Sorghum bicolor
Sobic.004G107500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 10298548-10299547 Sorghum bicolor
Sobic.004G107500 1.0kb downstream 1.0kb downstream 5175 true Chr04: 10293373-10298547 Sorghum bicolor
Sobic.004G107500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 10293373-10294372 Sorghum bicolor
Sobic.004G107500 2.0kb upstream 2.0kb upstream 6175 true Chr04: 10294373-10300547 Sorghum bicolor
Sobic.004G107500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 10298548-10300547 Sorghum bicolor
Sobic.004G107500 2.0kb downstream 2.0kb downstream 6175 true Chr04: 10292373-10298547 Sorghum bicolor
Sobic.004G107500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 10292373-10294372 Sorghum bicolor
Sobic.004G107500 5.0kb upstream 5.0kb upstream 9175 true Chr04: 10294373-10303547 Sorghum bicolor
Sobic.004G107500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 10298548-10303547 Sorghum bicolor
Sobic.004G107500 5.0kb downstream 5.0kb downstream 9175 true Chr04: 10289373-10298547 Sorghum bicolor
Sobic.004G107500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 10289373-10294372 Sorghum bicolor
Sobic.004G107500 10.0kb upstream 10.0kb upstream 14175 true Chr04: 10294373-10308547 Sorghum bicolor
Sobic.004G107500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 10298548-10308547 Sorghum bicolor
Sobic.004G107500 10.0kb downstream 10.0kb downstream 14175 true Chr04: 10284373-10298547 Sorghum bicolor
Sobic.004G107500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 10284373-10294372 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195096 5267 Panicoideae View MSA
124572952 5269 Grass View MSA
122043816 5273 Angiosperm View MSA
121310193 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.104        
cufflinks 8.884     High High
cufflinks 5.314        
cufflinks 2.216        
cufflinks 0.096        
cufflinks 6.304       High
cufflinks 6.707       High
cufflinks 1.272        
cufflinks 0.021     Low Low
cufflinks 0.024     Low Low
cufflinks 0.832        
cufflinks 0.633        
cufflinks 0.03     Low Low
cufflinks 0.547        
cufflinks 0.121        
cufflinks 14.548     High High
cufflinks 7.194       High
cufflinks 5.407        
cufflinks 6.862       High
cufflinks 5.045        
cufflinks 0.012     Low Low
cufflinks 1.531        
cufflinks 0.918        
cufflinks 0.8        
cufflinks 5.736       High
cufflinks 5.244        
cufflinks 0.042     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.44        
cufflinks 0.053     Low Low

0 Strain