Gene : Sobic.004G102400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR15629//PTHR15629:SF13 - SH3YL1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1063
Name:  ? Sobic.004G102400 Secondary Identifier:  ? PAC:37933233
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G102400 0.5kb upstream 0.5kb upstream 4945 true Chr04: 9560905-9565849 Sorghum bicolor
Sobic.004G102400 0.5kb upstream 0.5kb upstream 500 false Chr04: 9560905-9561404 Sorghum bicolor
Sobic.004G102400 0.5kb downstream 0.5kb downstream 4945 true Chr04: 9561405-9566349 Sorghum bicolor
Sobic.004G102400 0.5kb downstream 0.5kb downstream 500 false Chr04: 9565850-9566349 Sorghum bicolor
Sobic.004G102400 1.0kb upstream 1.0kb upstream 5445 true Chr04: 9560405-9565849 Sorghum bicolor
Sobic.004G102400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9560405-9561404 Sorghum bicolor
Sobic.004G102400 1.0kb downstream 1.0kb downstream 5445 true Chr04: 9561405-9566849 Sorghum bicolor
Sobic.004G102400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9565850-9566849 Sorghum bicolor
Sobic.004G102400 2.0kb upstream 2.0kb upstream 6445 true Chr04: 9559405-9565849 Sorghum bicolor
Sobic.004G102400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9559405-9561404 Sorghum bicolor
Sobic.004G102400 2.0kb downstream 2.0kb downstream 6445 true Chr04: 9561405-9567849 Sorghum bicolor
Sobic.004G102400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9565850-9567849 Sorghum bicolor
Sobic.004G102400 5.0kb upstream 5.0kb upstream 9445 true Chr04: 9556405-9565849 Sorghum bicolor
Sobic.004G102400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9556405-9561404 Sorghum bicolor
Sobic.004G102400 5.0kb downstream 5.0kb downstream 9445 true Chr04: 9561405-9570849 Sorghum bicolor
Sobic.004G102400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9565850-9570849 Sorghum bicolor
Sobic.004G102400 10.0kb upstream 10.0kb upstream 14445 true Chr04: 9551405-9565849 Sorghum bicolor
Sobic.004G102400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9551405-9561404 Sorghum bicolor
Sobic.004G102400 10.0kb downstream 10.0kb downstream 14445 true Chr04: 9561405-9575849 Sorghum bicolor
Sobic.004G102400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 9565850-9575849 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182926 5267 Panicoideae View MSA
124586482 5269 Grass View MSA
122047876 5273 Angiosperm View MSA
121349418 5274 Embryophyte View MSA
123426176 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.719       Low
cufflinks 2.92       Low
cufflinks 4.652        
cufflinks 6.658        
cufflinks 2.571       Low
cufflinks 5.181        
cufflinks 3.994        
cufflinks 5.224        
cufflinks 7.072        
cufflinks 9.606       High
cufflinks 6.386        
cufflinks 10.653       High
cufflinks 5.991        
cufflinks 6.914        
cufflinks 5.173        
cufflinks 4.583        
cufflinks 4.724        
cufflinks 4.56        
cufflinks 4.813        
cufflinks 6.987        
cufflinks 1.706       Low
cufflinks 4.673        
cufflinks 7.158        
cufflinks 6.282        
cufflinks 5.75        
cufflinks 3.608        
cufflinks 7.634       High
cufflinks 1.966       Low
cufflinks 4.209        
cufflinks 5.492        

0 Strain