Gene : Sobic.009G013400 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR15371//PTHR15371:SF2 - TIM23 // OUTER ENVELOPE PORE PROTEIN 16-1, CHLOROPLASTIC Genomic Order:  131
Name:  ? Sobic.009G013400 Secondary Identifier:  ? PAC:37922587
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G013400 0.5kb upstream 0.5kb upstream 4120 true Chr09: 1181180-1185299 Sorghum bicolor
Sobic.009G013400 0.5kb upstream 0.5kb upstream 500 false Chr09: 1181180-1181679 Sorghum bicolor
Sobic.009G013400 0.5kb downstream 0.5kb downstream 4120 true Chr09: 1181680-1185799 Sorghum bicolor
Sobic.009G013400 0.5kb downstream 0.5kb downstream 500 false Chr09: 1185300-1185799 Sorghum bicolor
Sobic.009G013400 1.0kb upstream 1.0kb upstream 4620 true Chr09: 1180680-1185299 Sorghum bicolor
Sobic.009G013400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 1180680-1181679 Sorghum bicolor
Sobic.009G013400 1.0kb downstream 1.0kb downstream 4620 true Chr09: 1181680-1186299 Sorghum bicolor
Sobic.009G013400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 1185300-1186299 Sorghum bicolor
Sobic.009G013400 2.0kb upstream 2.0kb upstream 5620 true Chr09: 1179680-1185299 Sorghum bicolor
Sobic.009G013400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 1179680-1181679 Sorghum bicolor
Sobic.009G013400 2.0kb downstream 2.0kb downstream 5620 true Chr09: 1181680-1187299 Sorghum bicolor
Sobic.009G013400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 1185300-1187299 Sorghum bicolor
Sobic.009G013400 5.0kb upstream 5.0kb upstream 8620 true Chr09: 1176680-1185299 Sorghum bicolor
Sobic.009G013400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 1176680-1181679 Sorghum bicolor
Sobic.009G013400 5.0kb downstream 5.0kb downstream 8620 true Chr09: 1181680-1190299 Sorghum bicolor
Sobic.009G013400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 1185300-1190299 Sorghum bicolor
Sobic.009G013400 10.0kb upstream 10.0kb upstream 13620 true Chr09: 1171680-1185299 Sorghum bicolor
Sobic.009G013400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 1171680-1181679 Sorghum bicolor
Sobic.009G013400 10.0kb downstream 10.0kb downstream 13620 true Chr09: 1181680-1195299 Sorghum bicolor
Sobic.009G013400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 1185300-1195299 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176927 5267 Panicoideae View MSA
124577178 5269 Grass View MSA
122042494 5273 Angiosperm View MSA
121351081 5274 Embryophyte View MSA
123382000 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.892       Low
cufflinks 1.708        
cufflinks 2.715        
cufflinks 1.769        
cufflinks 5.856        
cufflinks 2.057        
cufflinks 6.589       High
cufflinks 5.09        
cufflinks 1.971        
cufflinks 2.457        
cufflinks 0.991       Low
cufflinks 0.866       Low
cufflinks 1.703        
cufflinks 1.948        
cufflinks 6.939       High
cufflinks 3.34        
cufflinks 7.793       High
cufflinks 9.231       High
cufflinks 1.97        
cufflinks 3.435        
cufflinks 7.677       High
cufflinks 2.172        
cufflinks 1.624        
cufflinks 1.378        
cufflinks 0.81       Low
cufflinks 2.227        
cufflinks 1.436        
cufflinks 1.751        
cufflinks 10.598       High
cufflinks 13.594     High High

0 Strain