Gene : Sobic.009G014500 S. bicolor v3.1.1
Defline:  similar to Putative uncharacterized protein Genomic Order:  143
Name:  ? Sobic.009G014500 Secondary Identifier:  ? PAC:37920643
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G014500 0.5kb upstream 0.5kb upstream 6259 true Chr09: 1257750-1264008 Sorghum bicolor
Sobic.009G014500 0.5kb upstream 0.5kb upstream 500 false Chr09: 1263509-1264008 Sorghum bicolor
Sobic.009G014500 0.5kb downstream 0.5kb downstream 6259 true Chr09: 1257250-1263508 Sorghum bicolor
Sobic.009G014500 0.5kb downstream 0.5kb downstream 500 false Chr09: 1257250-1257749 Sorghum bicolor
Sobic.009G014500 1.0kb upstream 1.0kb upstream 6759 true Chr09: 1257750-1264508 Sorghum bicolor
Sobic.009G014500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 1263509-1264508 Sorghum bicolor
Sobic.009G014500 1.0kb downstream 1.0kb downstream 6759 true Chr09: 1256750-1263508 Sorghum bicolor
Sobic.009G014500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 1256750-1257749 Sorghum bicolor
Sobic.009G014500 2.0kb upstream 2.0kb upstream 7759 true Chr09: 1257750-1265508 Sorghum bicolor
Sobic.009G014500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 1263509-1265508 Sorghum bicolor
Sobic.009G014500 2.0kb downstream 2.0kb downstream 7759 true Chr09: 1255750-1263508 Sorghum bicolor
Sobic.009G014500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 1255750-1257749 Sorghum bicolor
Sobic.009G014500 5.0kb upstream 5.0kb upstream 10759 true Chr09: 1257750-1268508 Sorghum bicolor
Sobic.009G014500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 1263509-1268508 Sorghum bicolor
Sobic.009G014500 5.0kb downstream 5.0kb downstream 10759 true Chr09: 1252750-1263508 Sorghum bicolor
Sobic.009G014500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 1252750-1257749 Sorghum bicolor
Sobic.009G014500 10.0kb upstream 10.0kb upstream 15759 true Chr09: 1257750-1273508 Sorghum bicolor
Sobic.009G014500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 1263509-1273508 Sorghum bicolor
Sobic.009G014500 10.0kb downstream 10.0kb downstream 15759 true Chr09: 1247750-1263508 Sorghum bicolor
Sobic.009G014500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 1247750-1257749 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186899 5267 Panicoideae View MSA
124587071 5269 Grass View MSA
122046156 5273 Angiosperm View MSA
121344204 5274 Embryophyte View MSA
123425750 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.785       High
cufflinks 0.011     Low Low
cufflinks 0.073        
cufflinks 0.089        
cufflinks 0.25        
cufflinks 0.155        
cufflinks 0.129        
cufflinks 0.024     Low Low
cufflinks 0.226        
cufflinks 0.155        
cufflinks 0.18        
cufflinks 0.211        
cufflinks 0.14        
cufflinks 0.226        
cufflinks 0.177        
cufflinks 0.037     Low Low
cufflinks 0.156        
cufflinks 0.151        
cufflinks 0.035     Low Low
cufflinks 0.144        
cufflinks 0.593       High
cufflinks 0.293        
cufflinks 0.253        
cufflinks 0.266        
cufflinks 0.023     Low Low
cufflinks 0.006     Low Low
cufflinks 0.139        
cufflinks 0.265        
cufflinks 0.062     Low  
cufflinks 0.263        

0 Strain