Gene : Sobic.009G020900 S. bicolor v3.1.1
Defline:  (1 of 2) PF00122//PF00689//PF00690//PF00702 - E1-E2 ATPase (E1-E2_ATPase) // Cation transporting ATPase, C-terminus (Cation_ATPase_C) // Cation transporter/ATPase, N-terminus (Cation_ATPase_N) // haloacid dehalogenase-like hydrolase (Hydrolase) Genomic Order:  208
Name:  ? Sobic.009G020900 Secondary Identifier:  ? PAC:37920828
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G020900 0.5kb upstream 0.5kb upstream 5216 true Chr09: 1858987-1864202 Sorghum bicolor
Sobic.009G020900 0.5kb upstream 0.5kb upstream 500 false Chr09: 1863703-1864202 Sorghum bicolor
Sobic.009G020900 0.5kb downstream 0.5kb downstream 5216 true Chr09: 1858487-1863702 Sorghum bicolor
Sobic.009G020900 0.5kb downstream 0.5kb downstream 500 false Chr09: 1858487-1858986 Sorghum bicolor
Sobic.009G020900 1.0kb upstream 1.0kb upstream 5716 true Chr09: 1858987-1864702 Sorghum bicolor
Sobic.009G020900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 1863703-1864702 Sorghum bicolor
Sobic.009G020900 1.0kb downstream 1.0kb downstream 5716 true Chr09: 1857987-1863702 Sorghum bicolor
Sobic.009G020900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 1857987-1858986 Sorghum bicolor
Sobic.009G020900 2.0kb upstream 2.0kb upstream 6716 true Chr09: 1858987-1865702 Sorghum bicolor
Sobic.009G020900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 1863703-1865702 Sorghum bicolor
Sobic.009G020900 2.0kb downstream 2.0kb downstream 6716 true Chr09: 1856987-1863702 Sorghum bicolor
Sobic.009G020900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 1856987-1858986 Sorghum bicolor
Sobic.009G020900 5.0kb upstream 5.0kb upstream 9716 true Chr09: 1858987-1868702 Sorghum bicolor
Sobic.009G020900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 1863703-1868702 Sorghum bicolor
Sobic.009G020900 5.0kb downstream 5.0kb downstream 9716 true Chr09: 1853987-1863702 Sorghum bicolor
Sobic.009G020900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 1853987-1858986 Sorghum bicolor
Sobic.009G020900 10.0kb upstream 10.0kb upstream 14716 true Chr09: 1858987-1873702 Sorghum bicolor
Sobic.009G020900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 1863703-1873702 Sorghum bicolor
Sobic.009G020900 10.0kb downstream 10.0kb downstream 14716 true Chr09: 1848987-1863702 Sorghum bicolor
Sobic.009G020900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 1848987-1858986 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175793 5267 Panicoideae View MSA
124581961 5269 Grass View MSA
122046254 5273 Angiosperm View MSA
121349492 5274 Embryophyte View MSA
123427421 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.833       Low
cufflinks 7.896     High Low
cufflinks 13.509     High  
cufflinks 11.007        
cufflinks 20.132     High  
cufflinks 13.86     High  
cufflinks 15.633     High  
cufflinks 19.654     High  
cufflinks 15.322     High  
cufflinks 12.064     High  
cufflinks 23.203     High  
cufflinks 31.894     High High
cufflinks 16.291     High  
cufflinks 28.88     High High
cufflinks 31.009     High High
cufflinks 13.26     High  
cufflinks 20.263     High  
cufflinks 12.964     High  
cufflinks 10.723        
cufflinks 22.299     High  
cufflinks 16.923     High  
cufflinks 19.045     High  
cufflinks 34.0     High High
cufflinks 33.405     High High
cufflinks 11.111     High  
cufflinks 13.511     High  
cufflinks 20.574     High  
cufflinks 4.195       Low
cufflinks 9.873       Low
cufflinks 44.991     High High

0 Strain