Gene : Sobic.009G024300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR30238:SF0 - PROTEIN PIGMENT DEFECTIVE 149 Genomic Order:  243
Name:  ? Sobic.009G024300 Secondary Identifier:  ? PAC:37919718
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G024300 0.5kb upstream 0.5kb upstream 4320 true Chr09: 2163642-2167961 Sorghum bicolor
Sobic.009G024300 0.5kb upstream 0.5kb upstream 500 false Chr09: 2167462-2167961 Sorghum bicolor
Sobic.009G024300 0.5kb downstream 0.5kb downstream 4320 true Chr09: 2163142-2167461 Sorghum bicolor
Sobic.009G024300 0.5kb downstream 0.5kb downstream 500 false Chr09: 2163142-2163641 Sorghum bicolor
Sobic.009G024300 1.0kb upstream 1.0kb upstream 4820 true Chr09: 2163642-2168461 Sorghum bicolor
Sobic.009G024300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 2167462-2168461 Sorghum bicolor
Sobic.009G024300 1.0kb downstream 1.0kb downstream 4820 true Chr09: 2162642-2167461 Sorghum bicolor
Sobic.009G024300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 2162642-2163641 Sorghum bicolor
Sobic.009G024300 2.0kb upstream 2.0kb upstream 5820 true Chr09: 2163642-2169461 Sorghum bicolor
Sobic.009G024300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 2167462-2169461 Sorghum bicolor
Sobic.009G024300 2.0kb downstream 2.0kb downstream 5820 true Chr09: 2161642-2167461 Sorghum bicolor
Sobic.009G024300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 2161642-2163641 Sorghum bicolor
Sobic.009G024300 5.0kb upstream 5.0kb upstream 8820 true Chr09: 2163642-2172461 Sorghum bicolor
Sobic.009G024300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 2167462-2172461 Sorghum bicolor
Sobic.009G024300 5.0kb downstream 5.0kb downstream 8820 true Chr09: 2158642-2167461 Sorghum bicolor
Sobic.009G024300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 2158642-2163641 Sorghum bicolor
Sobic.009G024300 10.0kb upstream 10.0kb upstream 13820 true Chr09: 2163642-2177461 Sorghum bicolor
Sobic.009G024300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 2167462-2177461 Sorghum bicolor
Sobic.009G024300 10.0kb downstream 10.0kb downstream 13820 true Chr09: 2153642-2167461 Sorghum bicolor
Sobic.009G024300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 2153642-2163641 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026321 5273 Angiosperm View MSA
122189898 5267 Panicoideae View MSA
124573964 5269 Grass View MSA
121349426 5274 Embryophyte View MSA
123424964 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.89        
cufflinks 6.057        
cufflinks 8.188       High
cufflinks 6.64        
cufflinks 1.652       Low
cufflinks 4.561        
cufflinks 9.172       High
cufflinks 7.702       High
cufflinks 3.845        
cufflinks 3.765        
cufflinks 2.214        
cufflinks 2.612        
cufflinks 2.729        
cufflinks 2.349        
cufflinks 3.163        
cufflinks 6.861       High
cufflinks 10.381       High
cufflinks 13.642     High High
cufflinks 5.756        
cufflinks 9.492       High
cufflinks 2.073        
cufflinks 1.934        
cufflinks 2.55        
cufflinks 2.305        
cufflinks 6.379        
cufflinks 5.462        
cufflinks 1.584       Low
cufflinks 1.438       Low
cufflinks 12.921     High High
cufflinks 3.494        

0 Strain