Gene : Sobic.004G096300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13832//PTHR13832:SF308 - PROTEIN PHOSPHATASE 2C // SUBFAMILY NOT NAMED Genomic Order:  1001
Name:  ? Sobic.004G096300 Secondary Identifier:  ? PAC:37932942
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G096300 0.5kb upstream 0.5kb upstream 3499 true Chr04: 8523545-8527043 Sorghum bicolor
Sobic.004G096300 0.5kb upstream 0.5kb upstream 500 false Chr04: 8523545-8524044 Sorghum bicolor
Sobic.004G096300 0.5kb downstream 0.5kb downstream 3499 true Chr04: 8524045-8527543 Sorghum bicolor
Sobic.004G096300 0.5kb downstream 0.5kb downstream 500 false Chr04: 8527044-8527543 Sorghum bicolor
Sobic.004G096300 1.0kb upstream 1.0kb upstream 3999 true Chr04: 8523045-8527043 Sorghum bicolor
Sobic.004G096300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 8523045-8524044 Sorghum bicolor
Sobic.004G096300 1.0kb downstream 1.0kb downstream 3999 true Chr04: 8524045-8528043 Sorghum bicolor
Sobic.004G096300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 8527044-8528043 Sorghum bicolor
Sobic.004G096300 2.0kb upstream 2.0kb upstream 4999 true Chr04: 8522045-8527043 Sorghum bicolor
Sobic.004G096300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 8522045-8524044 Sorghum bicolor
Sobic.004G096300 2.0kb downstream 2.0kb downstream 4999 true Chr04: 8524045-8529043 Sorghum bicolor
Sobic.004G096300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 8527044-8529043 Sorghum bicolor
Sobic.004G096300 5.0kb upstream 5.0kb upstream 7999 true Chr04: 8519045-8527043 Sorghum bicolor
Sobic.004G096300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 8519045-8524044 Sorghum bicolor
Sobic.004G096300 5.0kb downstream 5.0kb downstream 7999 true Chr04: 8524045-8532043 Sorghum bicolor
Sobic.004G096300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 8527044-8532043 Sorghum bicolor
Sobic.004G096300 10.0kb upstream 10.0kb upstream 12999 true Chr04: 8514045-8527043 Sorghum bicolor
Sobic.004G096300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 8514045-8524044 Sorghum bicolor
Sobic.004G096300 10.0kb downstream 10.0kb downstream 12999 true Chr04: 8524045-8537043 Sorghum bicolor
Sobic.004G096300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 8527044-8537043 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184594 5267 Panicoideae View MSA
124574206 5269 Grass View MSA
122048626 5273 Angiosperm View MSA
121351805 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.898        
cufflinks 14.975     High  
cufflinks 16.347     High  
cufflinks 19.313     High  
cufflinks 0.553       Low
cufflinks 32.234     High High
cufflinks 4.016        
cufflinks 8.901     High  
cufflinks 7.793        
cufflinks 5.183        
cufflinks 7.699        
cufflinks 22.364     High  
cufflinks 5.247        
cufflinks 11.615     High  
cufflinks 7.431        
cufflinks 43.43     High High
cufflinks 4.782        
cufflinks 5.127        
cufflinks 18.441     High  
cufflinks 6.462        
cufflinks 0.079     Low Low
cufflinks 4.536        
cufflinks 8.944        
cufflinks 7.931        
cufflinks 30.98     High High
cufflinks 13.918     High  
cufflinks 11.009        
cufflinks 2.455        
cufflinks 3.683        
cufflinks 8.183        

0 Strain