Gene : Sobic.004G147500 S. bicolor v3.1.1
Defline:  (1 of 1) K09667 - protein O-GlcNAc transferase (OGT) Genomic Order:  1536
Name:  ? Sobic.004G147500 Secondary Identifier:  ? PAC:37930462
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-7437 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G147500 0.5kb upstream 0.5kb upstream 15621 true Chr04: 46308281-46323901 Sorghum bicolor
Sobic.004G147500 0.5kb upstream 0.5kb upstream 500 false Chr04: 46323402-46323901 Sorghum bicolor
Sobic.004G147500 0.5kb downstream 0.5kb downstream 15621 true Chr04: 46307781-46323401 Sorghum bicolor
Sobic.004G147500 0.5kb downstream 0.5kb downstream 500 false Chr04: 46307781-46308280 Sorghum bicolor
Sobic.004G147500 1.0kb upstream 1.0kb upstream 16121 true Chr04: 46308281-46324401 Sorghum bicolor
Sobic.004G147500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46323402-46324401 Sorghum bicolor
Sobic.004G147500 1.0kb downstream 1.0kb downstream 16121 true Chr04: 46307281-46323401 Sorghum bicolor
Sobic.004G147500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46307281-46308280 Sorghum bicolor
Sobic.004G147500 2.0kb upstream 2.0kb upstream 17121 true Chr04: 46308281-46325401 Sorghum bicolor
Sobic.004G147500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46323402-46325401 Sorghum bicolor
Sobic.004G147500 2.0kb downstream 2.0kb downstream 17121 true Chr04: 46306281-46323401 Sorghum bicolor
Sobic.004G147500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46306281-46308280 Sorghum bicolor
Sobic.004G147500 5.0kb upstream 5.0kb upstream 20121 true Chr04: 46308281-46328401 Sorghum bicolor
Sobic.004G147500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46323402-46328401 Sorghum bicolor
Sobic.004G147500 5.0kb downstream 5.0kb downstream 20121 true Chr04: 46303281-46323401 Sorghum bicolor
Sobic.004G147500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46303281-46308280 Sorghum bicolor
Sobic.004G147500 10.0kb upstream 10.0kb upstream 25121 true Chr04: 46308281-46333401 Sorghum bicolor
Sobic.004G147500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46323402-46333401 Sorghum bicolor
Sobic.004G147500 10.0kb downstream 10.0kb downstream 25121 true Chr04: 46298281-46323401 Sorghum bicolor
Sobic.004G147500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46298281-46308280 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188319 5267 Panicoideae View MSA
124589128 5269 Grass View MSA
122047286 5273 Angiosperm View MSA
121344424 5274 Embryophyte View MSA
123428836 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.002       Low
cufflinks 2.218       Low
cufflinks 2.739       Low
cufflinks 3.857        
cufflinks 7.965       High
cufflinks 4.206        
cufflinks 3.979        
cufflinks 4.245        
cufflinks 8.822       High
cufflinks 8.624       High
cufflinks 3.371        
cufflinks 2.425       Low
cufflinks 5.647        
cufflinks 3.245        
cufflinks 8.15       High
cufflinks 2.953        
cufflinks 3.878        
cufflinks 3.676        
cufflinks 4.783        
cufflinks 4.384        
cufflinks 11.596       High
cufflinks 4.631        
cufflinks 3.245        
cufflinks 3.379        
cufflinks 4.554        
cufflinks 3.605        
cufflinks 3.616        
cufflinks 8.069       High
cufflinks 4.244        
cufflinks 9.647       High

0 Strain