Gene : Sobic.004G140300 S. bicolor v3.1.1
Defline:  (1 of 1) 1.3.1.21 - 7-dehydrocholesterol reductase / Sterol Delta(7)-reductase Genomic Order:  1465
Name:  ? Sobic.004G140300 Secondary Identifier:  ? PAC:37931170
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-2541 Sorghum bicolor pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G140300 0.5kb upstream 0.5kb upstream 5906 true Chr04: 40798884-40804789 Sorghum bicolor
Sobic.004G140300 0.5kb upstream 0.5kb upstream 500 false Chr04: 40798884-40799383 Sorghum bicolor
Sobic.004G140300 0.5kb downstream 0.5kb downstream 5906 true Chr04: 40799384-40805289 Sorghum bicolor
Sobic.004G140300 0.5kb downstream 0.5kb downstream 500 false Chr04: 40804790-40805289 Sorghum bicolor
Sobic.004G140300 1.0kb upstream 1.0kb upstream 6406 true Chr04: 40798384-40804789 Sorghum bicolor
Sobic.004G140300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 40798384-40799383 Sorghum bicolor
Sobic.004G140300 1.0kb downstream 1.0kb downstream 6406 true Chr04: 40799384-40805789 Sorghum bicolor
Sobic.004G140300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 40804790-40805789 Sorghum bicolor
Sobic.004G140300 2.0kb upstream 2.0kb upstream 7406 true Chr04: 40797384-40804789 Sorghum bicolor
Sobic.004G140300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 40797384-40799383 Sorghum bicolor
Sobic.004G140300 2.0kb downstream 2.0kb downstream 7406 true Chr04: 40799384-40806789 Sorghum bicolor
Sobic.004G140300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 40804790-40806789 Sorghum bicolor
Sobic.004G140300 5.0kb upstream 5.0kb upstream 10406 true Chr04: 40794384-40804789 Sorghum bicolor
Sobic.004G140300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 40794384-40799383 Sorghum bicolor
Sobic.004G140300 5.0kb downstream 5.0kb downstream 10406 true Chr04: 40799384-40809789 Sorghum bicolor
Sobic.004G140300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 40804790-40809789 Sorghum bicolor
Sobic.004G140300 10.0kb upstream 10.0kb upstream 15406 true Chr04: 40789384-40804789 Sorghum bicolor
Sobic.004G140300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 40789384-40799383 Sorghum bicolor
Sobic.004G140300 10.0kb downstream 10.0kb downstream 15406 true Chr04: 40799384-40814789 Sorghum bicolor
Sobic.004G140300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 40804790-40814789 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185822 5267 Panicoideae View MSA
124574487 5269 Grass View MSA
122045488 5273 Angiosperm View MSA
121344145 5274 Embryophyte View MSA
123426486 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.022        
cufflinks 1.602       Low
cufflinks 6.118       Low
cufflinks 13.997     High  
cufflinks 32.3     High  
cufflinks 5.009       Low
cufflinks 18.323     High  
cufflinks 6.046       Low
cufflinks 31.017     High  
cufflinks 27.278     High  
cufflinks 24.369     High  
cufflinks 25.132     High  
cufflinks 15.879     High  
cufflinks 25.141     High  
cufflinks 13.031     High  
cufflinks 4.258       Low
cufflinks 18.471     High  
cufflinks 19.752     High  
cufflinks 7.931        
cufflinks 26.06     High  
cufflinks 30.457     High  
cufflinks 42.482     High High
cufflinks 32.996     High  
cufflinks 32.913     High  
cufflinks 4.835       Low
cufflinks 1.396       Low
cufflinks 13.442     High  
cufflinks 1.502       Low
cufflinks 15.683     High  
cufflinks 15.756     High  

0 Strain