Gene : Sobic.004G135400 S. bicolor v3.1.1
Defline:  (1 of 1) PF14661 - HAUS augmin-like complex subunit 6 N-terminus (HAUS6_N) Genomic Order:  1412
Name:  ? Sobic.004G135400 Secondary Identifier:  ? PAC:37931059
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G135400 0.5kb upstream 0.5kb upstream 16359 true Chr04: 32790491-32806849 Sorghum bicolor
Sobic.004G135400 0.5kb upstream 0.5kb upstream 500 false Chr04: 32790491-32790990 Sorghum bicolor
Sobic.004G135400 0.5kb downstream 0.5kb downstream 16359 true Chr04: 32790991-32807349 Sorghum bicolor
Sobic.004G135400 0.5kb downstream 0.5kb downstream 500 false Chr04: 32806850-32807349 Sorghum bicolor
Sobic.004G135400 1.0kb upstream 1.0kb upstream 16859 true Chr04: 32789991-32806849 Sorghum bicolor
Sobic.004G135400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 32789991-32790990 Sorghum bicolor
Sobic.004G135400 1.0kb downstream 1.0kb downstream 16859 true Chr04: 32790991-32807849 Sorghum bicolor
Sobic.004G135400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 32806850-32807849 Sorghum bicolor
Sobic.004G135400 2.0kb upstream 2.0kb upstream 17859 true Chr04: 32788991-32806849 Sorghum bicolor
Sobic.004G135400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 32788991-32790990 Sorghum bicolor
Sobic.004G135400 2.0kb downstream 2.0kb downstream 17859 true Chr04: 32790991-32808849 Sorghum bicolor
Sobic.004G135400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 32806850-32808849 Sorghum bicolor
Sobic.004G135400 5.0kb upstream 5.0kb upstream 20859 true Chr04: 32785991-32806849 Sorghum bicolor
Sobic.004G135400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 32785991-32790990 Sorghum bicolor
Sobic.004G135400 5.0kb downstream 5.0kb downstream 20859 true Chr04: 32790991-32811849 Sorghum bicolor
Sobic.004G135400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 32806850-32811849 Sorghum bicolor
Sobic.004G135400 10.0kb upstream 10.0kb upstream 25859 true Chr04: 32780991-32806849 Sorghum bicolor
Sobic.004G135400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 32780991-32790990 Sorghum bicolor
Sobic.004G135400 10.0kb downstream 10.0kb downstream 25859 true Chr04: 32790991-32816849 Sorghum bicolor
Sobic.004G135400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 32806850-32816849 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195821 5267 Panicoideae View MSA
124568297 5269 Grass View MSA
122045582 5273 Angiosperm View MSA
121351307 5274 Embryophyte View MSA
123382113 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.871        
cufflinks 2.792       Low
cufflinks 6.413        
cufflinks 6.548        
cufflinks 8.813        
cufflinks 7.215        
cufflinks 7.917        
cufflinks 3.221       Low
cufflinks 10.743       High
cufflinks 10.253        
cufflinks 6.981        
cufflinks 9.62        
cufflinks 10.229        
cufflinks 8.684        
cufflinks 9.477        
cufflinks 4.661       Low
cufflinks 7.624        
cufflinks 7.866        
cufflinks 5.487        
cufflinks 8.705        
cufflinks 10.842       High
cufflinks 7.603        
cufflinks 9.471        
cufflinks 9.13        
cufflinks 4.206       Low
cufflinks 2.602       Low
cufflinks 7.706        
cufflinks 3.66       Low
cufflinks 5.96        
cufflinks 9.453        

0 Strain