Gene : Sobic.004G131800 S. bicolor v3.1.1
Defline:  (1 of 1) PF01903 - CbiX (CbiX) Genomic Order:  1371
Name:  ? Sobic.004G131800 Secondary Identifier:  ? PAC:37931820
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G131800 0.5kb upstream 0.5kb upstream 17715 true Chr04: 19511822-19529536 Sorghum bicolor
Sobic.004G131800 0.5kb upstream 0.5kb upstream 500 false Chr04: 19529037-19529536 Sorghum bicolor
Sobic.004G131800 0.5kb downstream 0.5kb downstream 17715 true Chr04: 19511322-19529036 Sorghum bicolor
Sobic.004G131800 0.5kb downstream 0.5kb downstream 500 false Chr04: 19511322-19511821 Sorghum bicolor
Sobic.004G131800 1.0kb upstream 1.0kb upstream 18215 true Chr04: 19511822-19530036 Sorghum bicolor
Sobic.004G131800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 19529037-19530036 Sorghum bicolor
Sobic.004G131800 1.0kb downstream 1.0kb downstream 18215 true Chr04: 19510822-19529036 Sorghum bicolor
Sobic.004G131800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 19510822-19511821 Sorghum bicolor
Sobic.004G131800 2.0kb upstream 2.0kb upstream 19215 true Chr04: 19511822-19531036 Sorghum bicolor
Sobic.004G131800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 19529037-19531036 Sorghum bicolor
Sobic.004G131800 2.0kb downstream 2.0kb downstream 19215 true Chr04: 19509822-19529036 Sorghum bicolor
Sobic.004G131800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 19509822-19511821 Sorghum bicolor
Sobic.004G131800 5.0kb upstream 5.0kb upstream 22215 true Chr04: 19511822-19534036 Sorghum bicolor
Sobic.004G131800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 19529037-19534036 Sorghum bicolor
Sobic.004G131800 5.0kb downstream 5.0kb downstream 22215 true Chr04: 19506822-19529036 Sorghum bicolor
Sobic.004G131800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 19506822-19511821 Sorghum bicolor
Sobic.004G131800 10.0kb upstream 10.0kb upstream 27215 true Chr04: 19511822-19539036 Sorghum bicolor
Sobic.004G131800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 19529037-19539036 Sorghum bicolor
Sobic.004G131800 10.0kb downstream 10.0kb downstream 27215 true Chr04: 19501822-19529036 Sorghum bicolor
Sobic.004G131800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 19501822-19511821 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182268 5267 Panicoideae View MSA
124579830 5269 Grass View MSA
122045035 5273 Angiosperm View MSA
123429085 5275 Viridiplantae View MSA
121345906 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.889       Low
cufflinks 1.399        
cufflinks 1.779        
cufflinks 2.092        
cufflinks 2.363        
cufflinks 2.262        
cufflinks 1.858        
cufflinks 2.194        
cufflinks 3.169       High
cufflinks 2.929       High
cufflinks 0.916       Low
cufflinks 1.217        
cufflinks 2.595       High
cufflinks 1.048       Low
cufflinks 1.787        
cufflinks 1.702        
cufflinks 1.787        
cufflinks 1.916        
cufflinks 1.442        
cufflinks 1.911        
cufflinks 2.089        
cufflinks 0.925       Low
cufflinks 1.061       Low
cufflinks 1.003       Low
cufflinks 1.691        
cufflinks 1.729        
cufflinks 1.588        
cufflinks 1.698        
cufflinks 2.322        
cufflinks 1.539        

0 Strain