Gene : Sobic.004G130300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10666//PTHR10666:SF144 - UBIQUITIN // SUBFAMILY NOT NAMED Genomic Order:  1349
Name:  ? Sobic.004G130300 Secondary Identifier:  ? PAC:37934031
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6351 Sorghum bicolor pathologic  
Sbicolor PWY-6352 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G130300 0.5kb upstream 0.5kb upstream 3918 true Chr04: 16775995-16779912 Sorghum bicolor
Sobic.004G130300 0.5kb upstream 0.5kb upstream 500 false Chr04: 16779413-16779912 Sorghum bicolor
Sobic.004G130300 0.5kb downstream 0.5kb downstream 3918 true Chr04: 16775495-16779412 Sorghum bicolor
Sobic.004G130300 0.5kb downstream 0.5kb downstream 500 false Chr04: 16775495-16775994 Sorghum bicolor
Sobic.004G130300 1.0kb upstream 1.0kb upstream 4418 true Chr04: 16775995-16780412 Sorghum bicolor
Sobic.004G130300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 16779413-16780412 Sorghum bicolor
Sobic.004G130300 1.0kb downstream 1.0kb downstream 4418 true Chr04: 16774995-16779412 Sorghum bicolor
Sobic.004G130300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 16774995-16775994 Sorghum bicolor
Sobic.004G130300 2.0kb upstream 2.0kb upstream 5418 true Chr04: 16775995-16781412 Sorghum bicolor
Sobic.004G130300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 16779413-16781412 Sorghum bicolor
Sobic.004G130300 2.0kb downstream 2.0kb downstream 5418 true Chr04: 16773995-16779412 Sorghum bicolor
Sobic.004G130300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 16773995-16775994 Sorghum bicolor
Sobic.004G130300 5.0kb upstream 5.0kb upstream 8418 true Chr04: 16775995-16784412 Sorghum bicolor
Sobic.004G130300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 16779413-16784412 Sorghum bicolor
Sobic.004G130300 5.0kb downstream 5.0kb downstream 8418 true Chr04: 16770995-16779412 Sorghum bicolor
Sobic.004G130300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 16770995-16775994 Sorghum bicolor
Sobic.004G130300 10.0kb upstream 10.0kb upstream 13418 true Chr04: 16775995-16789412 Sorghum bicolor
Sobic.004G130300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 16779413-16789412 Sorghum bicolor
Sobic.004G130300 10.0kb downstream 10.0kb downstream 13418 true Chr04: 16765995-16779412 Sorghum bicolor
Sobic.004G130300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 16765995-16775994 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191721 5267 Panicoideae View MSA
124574453 5269 Grass View MSA
122042633 5273 Angiosperm View MSA
121350148 5274 Embryophyte View MSA
123381595 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.059     High High
cufflinks 9.448     High  
cufflinks 8.385        
cufflinks 5.032       Low
cufflinks 4.717       Low
cufflinks 8.297        
cufflinks 9.166        
cufflinks 7.919        
cufflinks 10.271        
cufflinks 10.565        
cufflinks 7.173        
cufflinks 10.296        
cufflinks 11.814     High High
cufflinks 7.33        
cufflinks 13.704     High High
cufflinks 11.069     High High
cufflinks 11.268       High
cufflinks 10.36        
cufflinks 7.194        
cufflinks 11.125       High
cufflinks 9.341        
cufflinks 5.381       Low
cufflinks 8.415        
cufflinks 8.142        
cufflinks 8.998     High  
cufflinks 7.313     High  
cufflinks 7.308        
cufflinks 10.648     High  
cufflinks 7.418        
cufflinks 10.972       High

0 Strain